Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL590233.1-201ENST00000430017 456 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGA1P17096 AC004383.1-201ENST00000438135 289 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGA1P17096 AC005410.1-202ENST00000460347 485 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 RNU2-19P-201ENST00000517288 84 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGA1P17096 AP005902.1-201ENST00000521358 186 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGA1P17096 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGA1P17096 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGA1P17096 MIR4299-201ENST00000577899 72 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 MIR4285-201ENST00000581001 85 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 AL161629.2-201ENST00000615347 275 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGA1P17096 AC109454.4-201ENST00000623411 649 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
HMGA1P17096 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.03□□□□□ -2.25
HMGA1P17096 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.02□□□□□ -2.25
HMGA1P17096 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HMGA1P17096 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HMGA1P17096 RPS3AP24-201ENST00000407896 734 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 RPL21P90-201ENST00000415692 466 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 MTCYBP7-201ENST00000419540 1134 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 TMEM167AP1-201ENST00000423409 219 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HMGA1P17096 CR848007.1-201ENST00000442354 1699 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 AC027575.1-201ENST00000481064 460 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGA1P17096 SNORA31.13-201ENST00000516624 135 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 RNU6-928P-201ENST00000516876 104 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.02□□□□□ -2.25
HMGA1P17096 AP005639.2-201ENST00000527592 928 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGA1P17096 AL137100.2-201ENST00000555786 315 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 AC008269.2-201ENST00000561915 1105 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 MTATP6P3-201ENST00000581686 676 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 PCNAP1-202ENST00000595299 752 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 AC123912.5-201ENST00000605470 343 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 RMST_2.1-201ENST00000617263 136 ntBASIC1.02□□□□□ -2.25
HMGA1P17096 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGA1P17096 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HMGA1P17096 Y_RNA.118-201ENST00000363300 101 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 RNU6-263P-201ENST00000363811 107 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 MIR489-201ENST00000384923 84 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AL133384.1-201ENST00000412744 351 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.01□□□□□ -2.25
HMGA1P17096 SDAD1P3-201ENST00000427380 333 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.01□□□□□ -2.25
HMGA1P17096 NDUFA5P4-201ENST00000436704 385 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.01□□□□□ -2.25
HMGA1P17096 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGA1P17096 AC023141.11-201ENST00000508864 202 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 IGKV2D-36-201ENST00000518643 226 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.01□□□□□ -2.25
HMGA1P17096 MTND2P26-201ENST00000528255 1029 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.01□□□□□ -2.25
HMGA1P17096 VN1R107P-201ENST00000601784 209 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AP005137.2-201ENST00000609238 400 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 MIR3199-2-201ENST00000636243 86 ntBASIC1.01□□□□□ -2.25
HMGA1P17096 AC005539.1-201ENST00000443768 1479 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC123912.3-201ENST00000600907 1367 ntBASIC1□□□□□ -2.25
HMGA1P17096 SDAD1P2-201ENST00000441308 2028 ntBASIC1□□□□□ -2.25
HMGA1P17096 SNORA23-201ENST00000365128 182 ntBASIC1□□□□□ -2.25
HMGA1P17096 RNU6-837P-201ENST00000391056 108 ntBASIC1□□□□□ -2.25
HMGA1P17096 RNU2-41P-201ENST00000410991 178 ntBASIC1□□□□□ -2.25
HMGA1P17096 VN1R36P-201ENST00000414936 291 ntBASIC1□□□□□ -2.25
HMGA1P17096 AL353689.1-201ENST00000438895 199 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1□□□□□ -2.25
HMGA1P17096 AC009238.1-201ENST00000442165 424 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC118469.1-201ENST00000442943 488 ntBASIC1□□□□□ -2.25
HMGA1P17096 AL078601.1-201ENST00000444542 271 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC009237.6-201ENST00000446969 424 ntBASIC1□□□□□ -2.25
HMGA1P17096 RPS27P1-201ENST00000450552 247 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1□□□□□ -2.25
HMGA1P17096 RPL12P25-201ENST00000455592 494 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC068781.1-201ENST00000488231 618 ntBASIC1□□□□□ -2.25
HMGA1P17096 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
HMGA1P17096 MRPS33P3-201ENST00000513456 322 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1□□□□□ -2.25
HMGA1P17096 FABP5P5-201ENST00000515537 406 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC011604.1-201ENST00000545978 196 ntBASIC1□□□□□ -2.25
HMGA1P17096 FAM60BP-201ENST00000578364 658 ntBASIC1□□□□□ -2.25
HMGA1P17096 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
HMGA1P17096 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1□□□□□ -2.25
HMGA1P17096 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1□□□□□ -2.25
HMGA1P17096 AL356473.1-201ENST00000406203 1408 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HMGA1P17096 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HMGA1P17096 RNU6-532P-201ENST00000384318 107 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 MIR150-201ENST00000385048 84 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 MIR548J-201ENST00000408833 112 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 RNA5SP450-201ENST00000411206 102 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 RNA5SP498-201ENST00000411342 120 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 SRIP3-201ENST00000413200 219 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 CYCSP33-201ENST00000414485 327 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms