Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 Y_RNA.178-201ENST00000363832 102 ntBASIC1.77□□□□□ -2.13
CFTRP13569 RNU2-32P-201ENST00000411193 191 ntBASIC1.77□□□□□ -2.13
CFTRP13569 RPL7P30-201ENST00000420888 709 ntBASIC1.77□□□□□ -2.13
CFTRP13569 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.77□□□□□ -2.13
CFTRP13569 COX6CP18-201ENST00000448769 222 ntBASIC1.77□□□□□ -2.13
CFTRP13569 RPS29P23-201ENST00000458635 123 ntBASIC1.77□□□□□ -2.13
CFTRP13569 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.77□□□□□ -2.13
CFTRP13569 SETP7-201ENST00000552169 453 ntBASIC1.77□□□□□ -2.13
CFTRP13569 SNORD114-21-201ENST00000606412 72 ntBASIC1.77□□□□□ -2.13
CFTRP13569 MIR7974-201ENST00000615835 79 ntBASIC1.77□□□□□ -2.13
CFTRP13569 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.77□□□□□ -2.13
CFTRP13569 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CFTRP13569 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CFTRP13569 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.76□□□□□ -2.13
CFTRP13569 RNU6-1105P-201ENST00000384774 107 ntBASIC1.76□□□□□ -2.13
CFTRP13569 MTCO3P12-201ENST00000416718 547 ntBASIC1.76□□□□□ -2.13
CFTRP13569 NDUFA5P10-201ENST00000432147 357 ntBASIC1.76□□□□□ -2.13
CFTRP13569 UBE2FP3-201ENST00000436366 524 ntBASIC1.76□□□□□ -2.13
CFTRP13569 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.76□□□□□ -2.13
CFTRP13569 AL139109.1-201ENST00000455491 297 ntBASIC1.76□□□□□ -2.13
CFTRP13569 RPL31P53-201ENST00000457065 348 ntBASIC1.76□□□□□ -2.13
CFTRP13569 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.76□□□□□ -2.13
CFTRP13569 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.76□□□□□ -2.13
CFTRP13569 MIR4658-201ENST00000584344 65 ntBASIC1.76□□□□□ -2.13
CFTRP13569 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.76□□□□□ -2.13
CFTRP13569 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CFTRP13569 RNU4-78P-201ENST00000410940 126 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AL445305.1-201ENST00000432577 575 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.75□□□□□ -2.13
CFTRP13569 AL121601.2-201ENST00000438019 707 ntBASIC1.75□□□□□ -2.13
CFTRP13569 SNORA31.23-201ENST00000517219 133 ntBASIC1.75□□□□□ -2.13
CFTRP13569 RPS15AP11-201ENST00000594193 385 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AC135178.6-201ENST00000605314 398 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AC005021.1-201ENST00000608730 355 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CFTRP13569 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CFTRP13569 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CFTRP13569 AL442644.1-201ENST00000454390 3105 ntBASIC1.75□□□□□ -2.13
CFTRP13569 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.75□□□□□ -2.13
CFTRP13569 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.75□□□□□ -2.13
CFTRP13569 AL355497.1-201ENST00000406262 551 ntBASIC1.75□□□□□ -2.13
CFTRP13569 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.75□□□□□ -2.13
CFTRP13569 RNU4-72P-201ENST00000410754 173 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.75□□□□□ -2.13
CFTRP13569 AL022400.1-201ENST00000423946 935 ntBASIC1.75□□□□□ -2.13
CFTRP13569 SNRPGP6-201ENST00000451124 220 ntBASIC1.75□□□□□ -2.13
CFTRP13569 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.75□□□□□ -2.13
CFTRP13569 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CFTRP13569 RNU2-44P-201ENST00000516795 194 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AC087481.2-201ENST00000565492 330 ntBASIC1.75□□□□□ -2.13
CFTRP13569 U6.48-201ENST00000618523 106 ntBASIC1.75□□□□□ -2.13
CFTRP13569 AC068880.5-201ENST00000624331 290 ntBASIC1.75□□□□□ -2.13
CFTRP13569 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.74□□□□□ -2.13
CFTRP13569 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
CFTRP13569 RNU6-263P-201ENST00000363811 107 ntBASIC1.74□□□□□ -2.13
CFTRP13569 RNU6-167P-201ENST00000384292 106 ntBASIC1.74□□□□□ -2.13
CFTRP13569 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.74□□□□□ -2.13
CFTRP13569 SFR1P1-201ENST00000403720 688 ntBASIC1.74□□□□□ -2.13
CFTRP13569 OR51A5P-201ENST00000415429 942 ntBASIC1.74□□□□□ -2.13
CFTRP13569 AC015922.2-201ENST00000435593 184 ntBASIC1.74□□□□□ -2.13
CFTRP13569 AC009296.1-201ENST00000443146 155 ntBASIC1.74□□□□□ -2.13
CFTRP13569 GDI2P2-201ENST00000445131 608 ntBASIC1.74□□□□□ -2.13
CFTRP13569 OR9N1P-202ENST00000494289 481 ntBASIC1.74□□□□□ -2.13
CFTRP13569 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.74□□□□□ -2.13
CFTRP13569 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.74□□□□□ -2.13
CFTRP13569 HSPE1P4-201ENST00000550617 308 ntBASIC1.74□□□□□ -2.13
CFTRP13569 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.74□□□□□ -2.13
CFTRP13569 AC108706.1-201ENST00000611053 297 ntBASIC1.74□□□□□ -2.13
CFTRP13569 MIR6857-201ENST00000613267 93 ntBASIC1.74□□□□□ -2.13
CFTRP13569 AC245884.12-201ENST00000615364 59 ntBASIC1.74□□□□□ -2.13
CFTRP13569 TEX21P-201ENST00000447107 1476 ntBASIC1.73□□□□□ -2.13
CFTRP13569 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CFTRP13569 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.73□□□□□ -2.13
CFTRP13569 TRIM60P13-201ENST00000432350 1283 ntBASIC1.73□□□□□ -2.13
CFTRP13569 AL645638.1-201ENST00000440519 361 ntBASIC1.73□□□□□ -2.13
CFTRP13569 AL583843.1-201ENST00000456070 346 ntBASIC1.73□□□□□ -2.13
CFTRP13569 RNU6-1132P-201ENST00000459214 107 ntBASIC1.73□□□□□ -2.13
CFTRP13569 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.73□□□□□ -2.13
CFTRP13569 HMGB1P46-201ENST00000520062 610 ntBASIC1.73□□□□□ -2.13
CFTRP13569 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.73□□□□□ -2.13
CFTRP13569 XIAPP1-201ENST00000603162 600 ntBASIC1.73□□□□□ -2.13
CFTRP13569 HSPE1P7-201ENST00000604681 321 ntBASIC1.73□□□□□ -2.13
CFTRP13569 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.73□□□□□ -2.13
CFTRP13569 AL161629.2-201ENST00000615347 275 ntBASIC1.73□□□□□ -2.13
CFTRP13569 AC092140.2-201ENST00000618027 521 ntBASIC1.73□□□□□ -2.13
CFTRP13569 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CFTRP13569 RNU6-193P-201ENST00000410977 107 ntBASIC1.72□□□□□ -2.13
CFTRP13569 AL135752.1-201ENST00000479477 471 ntBASIC1.72□□□□□ -2.13
CFTRP13569 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.72□□□□□ -2.13
CFTRP13569 AC108157.1-201ENST00000510511 539 ntBASIC1.72□□□□□ -2.13
CFTRP13569 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CFTRP13569 MIR4714-201ENST00000580728 77 ntBASIC1.72□□□□□ -2.13
CFTRP13569 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
CFTRP13569 BNIP3P7-201ENST00000605641 516 ntBASIC1.72□□□□□ -2.13
CFTRP13569 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CFTRP13569 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
CFTRP13569 MT-TC-201ENST00000387405 66 ntBASIC1.71□□□□□ -2.14
CFTRP13569 RPS20P15-201ENST00000412792 311 ntBASIC1.71□□□□□ -2.14
CFTRP13569 AL356320.2-201ENST00000417263 507 ntBASIC1.71□□□□□ -2.14
CFTRP13569 TMEM167AP1-201ENST00000423409 219 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms