Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU4-60P-201ENST00000517239 135 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.35□□□□□ -2.19
TOP2AP11388 AGGF1P5-201ENST00000567900 919 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 AC005332.10-201ENST00000612725 619 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 AC003001.2-201ENST00000616294 831 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.35□□□□□ -2.19
TOP2AP11388 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.35□□□□□ -2.19
TOP2AP11388 AC008739.2-201ENST00000597006 317 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 AC109454.4-201ENST00000623411 649 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.35□□□□□ -2.19
TOP2AP11388 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.35□□□□□ -2.19
TOP2AP11388 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.34□□□□□ -2.19
TOP2AP11388 RPS24P6-201ENST00000452670 400 ntBASIC1.34□□□□□ -2.2
TOP2AP11388 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.34□□□□□ -2.2
TOP2AP11388 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.34□□□□□ -2.2
TOP2AP11388 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.34□□□□□ -2.2
TOP2AP11388 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.34□□□□□ -2.2
TOP2AP11388 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.34□□□□□ -2.2
TOP2AP11388 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOP2AP11388 AC241520.1-201ENST00000422654 1099 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 XKRYP1-201ENST00000423438 492 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 SDAD1P3-201ENST00000427380 333 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 XKRYP2-201ENST00000432915 492 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.33□□□□□ -2.2
TOP2AP11388 AC108120.2-201ENST00000512973 294 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.33□□□□□ -2.2
TOP2AP11388 OR6C73P-201ENST00000546432 358 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOP2AP11388 AC106052.1-201ENST00000608029 497 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 AC007785.2-201ENST00000598627 1916 ntBASIC1.33□□□□□ -2.2
TOP2AP11388 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOP2AP11388 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.32□□□□□ -2.2
TOP2AP11388 MIR193B-201ENST00000384907 83 ntBASIC1.32□□□□□ -2.2
TOP2AP11388 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.32□□□□□ -2.2
TOP2AP11388 AC018437.1-201ENST00000492214 406 ntBASIC1.32□□□□□ -2.2
TOP2AP11388 AC105245.1-201ENST00000581934 244 ntBASIC1.32□□□□□ -2.2
TOP2AP11388 AL138955.1-201ENST00000622881 1040 ntBASIC1.32□□□□□ -2.2
TOP2AP11388 AC009541.1-201ENST00000438279 2662 ntBASIC1.32□□□□□ -2.2
TOP2AP11388 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.32□□□□□ -2.2
TOP2AP11388 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TOP2AP11388 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.31□□□□□ -2.2
TOP2AP11388 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.31□□□□□ -2.2
TOP2AP11388 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.31□□□□□ -2.2
TOP2AP11388 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.31□□□□□ -2.2
TOP2AP11388 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.31□□□□□ -2.2
TOP2AP11388 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TOP2AP11388 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TOP2AP11388 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TOP2AP11388 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.3□□□□□ -2.2
TOP2AP11388 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
TOP2AP11388 AL356432.1-201ENST00000405809 419 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.3□□□□□ -2.2
TOP2AP11388 AC023050.1-201ENST00000498198 304 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.3□□□□□ -2.2
TOP2AP11388 AC021146.8-201ENST00000507455 733 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 MTCYBP23-201ENST00000558717 1102 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AL161423.1-201ENST00000613700 262 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC009812.4-201ENST00000569134 1805 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC025263.3-201ENST00000622965 1396 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 SNORA3A-201ENST00000364113 130 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 SNORA16B-201ENST00000364674 135 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 MIR936-201ENST00000401264 98 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AL139397.2-201ENST00000404529 772 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TOP2AP11388 EZH2P1-201ENST00000431167 291 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 CABYRP1-201ENST00000465493 1045 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC087884.1-201ENST00000469738 328 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 NCOR1P1-202ENST00000486162 291 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 RPS27AP10-201ENST00000496103 208 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 TPT1P8-201ENST00000510120 555 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.3□□□□□ -2.2
TOP2AP11388 AC104997.1-201ENST00000519761 717 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC133485.1-201ENST00000567176 124 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC138907.6-201ENST00000568401 126 ntBASIC1.3□□□□□ -2.2
TOP2AP11388 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.3□□□□□ -2.2
TOP2AP11388 MIR508-201ENST00000384857 115 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 RPL7P34-201ENST00000433316 712 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TOP2AP11388 AC023141.11-201ENST00000508864 202 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 AC091965.2-201ENST00000512324 613 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 AC004812.1-201ENST00000540773 146 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 AC007742.2-201ENST00000618226 398 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 AC022079.2-201ENST00000619739 566 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TOP2AP11388 RNF6P1-201ENST00000444889 1784 ntBASIC1.29□□□□□ -2.2
TOP2AP11388 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.28□□□□□ -2.2
TOP2AP11388 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.28□□□□□ -2.2
TOP2AP11388 AC022022.1-201ENST00000430304 178 ntBASIC1.28□□□□□ -2.2
TOP2AP11388 USP12PX-201ENST00000432383 1057 ntBASIC1.28□□□□□ -2.2
TOP2AP11388 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.28□□□□□ -2.2
TOP2AP11388 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.28□□□□□ -2.2
TOP2AP11388 RNU6-351P-201ENST00000516097 100 ntBASIC1.28□□□□□ -2.2
TOP2AP11388 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.28□□□□□ -2.2
TOP2AP11388 AC084033.1-201ENST00000550830 633 ntBASIC1.28□□□□□ -2.2
TOP2AP11388 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.28□□□□□ -2.2
TOP2AP11388 AC068714.1-201ENST00000559623 800 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms