Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC068657.1-201ENST00000520807 306 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AC104027.1-201ENST00000521887 300 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AP000867.2-201ENST00000532468 320 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 HMGB1P14-201ENST00000557424 591 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 HMGB1P6-201ENST00000569046 646 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 NBR2-204ENST00000587322 63 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AC040904.1-201ENST00000590850 223 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AC119751.7-201ENST00000600494 245 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AC079089.3-201ENST00000603094 673 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL670379.6-201ENST00000603753 252 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL670379.11-201ENST00000604059 253 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AC008162.1-201ENST00000604718 254 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL670379.1-201ENST00000604752 252 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL670379.5-201ENST00000605253 252 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL670379.12-201ENST00000605291 253 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL670379.8-201ENST00000605353 252 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL670379.7-201ENST00000605823 252 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL451064.1-201ENST00000607718 471 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 PISRT1-201ENST00000626175 531 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 MTND1P37-201ENST00000636562 264 ntBASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RAB40ALP0C0E4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AL035425.3-201ENST00000564206 4996 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 U8.3-201ENST00000363321 132 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RNU1-101P-201ENST00000391171 127 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC127391.1-201ENST00000411737 98 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 HMGB1P27-201ENST00000431429 603 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 BNIP3P2-201ENST00000441221 577 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 KATNBL1P3-201ENST00000443475 909 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 USP9YP29-201ENST00000445112 563 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 SNRPGP6-201ENST00000451124 220 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC013267.1-201ENST00000458227 267 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RAP1BP2-201ENST00000478270 544 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC011825.1-201ENST00000484967 388 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AL160314.1-201ENST00000490836 438 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RNA5SP341-201ENST00000516261 117 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RNU7-51P-201ENST00000516560 62 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 SNORA18.6-201ENST00000516792 115 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RNU6-928P-201ENST00000516876 104 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AP005136.1-201ENST00000579765 429 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 RSL24D1P11-201ENST00000591045 491 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AL133173.2-201ENST00000614270 90 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AL589994.2-201ENST00000621124 579 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC018692.3-201ENST00000623929 123 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 AC090582.1-201ENST00000636321 199 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.04□□□□□ -1.92
RAB40ALP0C0E4 ZNF826P-207ENST00000622273 1910 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 FARSBP1-201ENST00000435808 1778 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 SNORD56.2-201ENST00000363242 71 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 RNY1P12-201ENST00000364251 105 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 Y_RNA.553-201ENST00000384670 102 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 RNA5SP252-201ENST00000391131 119 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AL138885.1-201ENST00000405921 675 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AL356968.1-201ENST00000416622 474 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AL365338.1-201ENST00000422282 858 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC104850.1-201ENST00000435940 476 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 GAPDHP17-201ENST00000449858 1001 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 RPS3AP14-201ENST00000483907 780 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC010265.1-201ENST00000513509 211 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 SNORD59.2-201ENST00000516873 68 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 RNA5SP290-201ENST00000517133 127 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AP002404.1-201ENST00000532005 451 ntBASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40ALP0C0E4 AC106782.4-201ENST00000568264 210 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms