Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC243972.3-201ENST00000539655 198 ntBASIC2.57□□□□□ -2
HOXC4P09017 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.57□□□□□ -2
HOXC4P09017 DNAJC8P1-201ENST00000554535 372 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC006362.1-201ENST00000567392 174 ntBASIC2.57□□□□□ -2
HOXC4P09017 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
HOXC4P09017 U73023.1-201ENST00000603134 700 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC004987.4-201ENST00000603383 338 ntBASIC2.57□□□□□ -2
HOXC4P09017 MTCYBP22-201ENST00000603788 447 ntBASIC2.57□□□□□ -2
HOXC4P09017 AL022099.1-201ENST00000604551 712 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC239868.4-201ENST00000608318 671 ntBASIC2.57□□□□□ -2
HOXC4P09017 AP002826.1-201ENST00000608835 315 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC013562.2-201ENST00000611632 603 ntBASIC2.57□□□□□ -2
HOXC4P09017 HULC.1-201ENST00000612720 240 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC008443.7-201ENST00000622195 246 ntBASIC2.57□□□□□ -2
HOXC4P09017 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
HOXC4P09017 AC079228.1-201ENST00000624774 1049 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC090582.1-201ENST00000636321 199 ntBASIC2.57□□□□□ -2
HOXC4P09017 AC099063.3-201ENST00000642066 185 ntBASIC2.57□□□□□ -2
HOXC4P09017 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXC4P09017 AP002907.1-201ENST00000606361 1430 ntBASIC2.57□□□□□ -2
HOXC4P09017 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.56□□□□□ -2
HOXC4P09017 AC233263.6-201ENST00000631132 1963 ntBASIC2.56□□□□□ -2
HOXC4P09017 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
HOXC4P09017 RPL21P132-201ENST00000331267 462 ntBASIC2.56□□□□□ -2
HOXC4P09017 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
HOXC4P09017 Y_RNA.302-201ENST00000364997 102 ntBASIC2.56□□□□□ -2
HOXC4P09017 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXC4P09017 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.56□□□□□ -2
HOXC4P09017 AL031779.1-201ENST00000415663 330 ntBASIC2.56□□□□□ -2
HOXC4P09017 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
HOXC4P09017 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.56□□□□□ -2
HOXC4P09017 CYCSP46-201ENST00000423569 204 ntBASIC2.56□□□□□ -2
HOXC4P09017 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.56□□□□□ -2
HOXC4P09017 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
HOXC4P09017 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXC4P09017 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.56□□□□□ -2
HOXC4P09017 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.56□□□□□ -2
HOXC4P09017 MTND1P34-201ENST00000438556 671 ntBASIC2.56□□□□□ -2
HOXC4P09017 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.56□□□□□ -2
HOXC4P09017 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.56□□□□□ -2
HOXC4P09017 AC103975.1-201ENST00000482506 483 ntBASIC2.56□□□□□ -2
HOXC4P09017 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HOXC4P09017 RNA5SP148-201ENST00000516527 94 ntBASIC2.56□□□□□ -2
HOXC4P09017 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXC4P09017 AC022880.1-201ENST00000534017 973 ntBASIC2.56□□□□□ -2
HOXC4P09017 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HOXC4P09017 OR6C7P-201ENST00000547875 934 ntBASIC2.56□□□□□ -2
HOXC4P09017 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.56□□□□□ -2
HOXC4P09017 SETP7-201ENST00000552169 453 ntBASIC2.56□□□□□ -2
HOXC4P09017 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.56□□□□□ -2
HOXC4P09017 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.56□□□□□ -2
HOXC4P09017 AGGF1P4-201ENST00000568249 801 ntBASIC2.56□□□□□ -2
HOXC4P09017 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.56□□□□□ -2
HOXC4P09017 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.56□□□□□ -2
HOXC4P09017 AP000254.1-201ENST00000609934 520 ntBASIC2.56□□□□□ -2
HOXC4P09017 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.56□□□□□ -2
HOXC4P09017 AC243829.7-201ENST00000633081 225 ntBASIC2.56□□□□□ -2
HOXC4P09017 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.56□□□□□ -2
HOXC4P09017 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.56□□□□□ -2
HOXC4P09017 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC4P09017 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC4P09017 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC4P09017 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC4P09017 Y_RNA.18-201ENST00000362461 102 ntBASIC2.55□□□□□ -2
HOXC4P09017 SNORD62.1-201ENST00000362541 86 ntBASIC2.55□□□□□ -2
HOXC4P09017 RNU6-623P-201ENST00000363143 105 ntBASIC2.55□□□□□ -2
HOXC4P09017 RNU6-799P-201ENST00000363567 107 ntBASIC2.55□□□□□ -2
HOXC4P09017 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXC4P09017 CD24P4-201ENST00000382840 243 ntBASIC2.55□□□□□ -2
HOXC4P09017 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
HOXC4P09017 Y_RNA.553-201ENST00000384670 102 ntBASIC2.55□□□□□ -2
HOXC4P09017 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
HOXC4P09017 SNRPEP2-201ENST00000397592 279 ntBASIC2.55□□□□□ -2
HOXC4P09017 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HOXC4P09017 AL031679.1-201ENST00000400616 525 ntBASIC2.55□□□□□ -2
HOXC4P09017 AL590004.2-201ENST00000404787 371 ntBASIC2.55□□□□□ -2
HOXC4P09017 SNORA11.2-201ENST00000408318 127 ntBASIC2.55□□□□□ -2
HOXC4P09017 RN7SKP142-201ENST00000411236 328 ntBASIC2.55□□□□□ -2
HOXC4P09017 MTCO1P21-201ENST00000416634 589 ntBASIC2.55□□□□□ -2
HOXC4P09017 MTCYBP38-201ENST00000417160 1123 ntBASIC2.55□□□□□ -2
HOXC4P09017 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.55□□□□□ -2
HOXC4P09017 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.55□□□□□ -2
HOXC4P09017 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.55□□□□□ -2
HOXC4P09017 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.55□□□□□ -2
HOXC4P09017 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.55□□□□□ -2
HOXC4P09017 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.55□□□□□ -2
HOXC4P09017 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.55□□□□□ -2
HOXC4P09017 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.55□□□□□ -2
HOXC4P09017 AL513328.1-201ENST00000446460 224 ntBASIC2.55□□□□□ -2
HOXC4P09017 VN1R10P-201ENST00000447106 875 ntBASIC2.55□□□□□ -2
HOXC4P09017 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.55□□□□□ -2
HOXC4P09017 AL359385.1-201ENST00000456509 365 ntBASIC2.55□□□□□ -2
HOXC4P09017 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
HOXC4P09017 RPS27AP9-201ENST00000477681 438 ntBASIC2.55□□□□□ -2
HOXC4P09017 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.55□□□□□ -2
HOXC4P09017 MTND4P2-201ENST00000507767 1203 ntBASIC2.55□□□□□ -2
HOXC4P09017 MTND3P5-201ENST00000512798 333 ntBASIC2.55□□□□□ -2
HOXC4P09017 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.55□□□□□ -2
HOXC4P09017 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.55□□□□□ -2
HOXC4P09017 MTND5P4-201ENST00000514978 288 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms