Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TRIM60P13-201ENST00000432350 1283 ntBASIC2.06□□□□□ -2.08
TPM3P06753 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.06□□□□□ -2.08
TPM3P06753 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
TPM3P06753 AC093155.1-201ENST00000440164 826 ntBASIC2.06□□□□□ -2.08
TPM3P06753 AL096803.2-201ENST00000450032 677 ntBASIC2.06□□□□□ -2.08
TPM3P06753 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.06□□□□□ -2.08
TPM3P06753 AC034222.1-201ENST00000494052 532 ntBASIC2.06□□□□□ -2.08
TPM3P06753 BOLA3P3-201ENST00000505182 232 ntBASIC2.06□□□□□ -2.08
TPM3P06753 RNA5SP291-201ENST00000517222 105 ntBASIC2.06□□□□□ -2.08
TPM3P06753 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.06□□□□□ -2.08
TPM3P06753 AP002770.2-201ENST00000543613 532 ntBASIC2.06□□□□□ -2.08
TPM3P06753 MIR4419B-201ENST00000577260 68 ntBASIC2.06□□□□□ -2.08
TPM3P06753 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
TPM3P06753 MIR3618-201ENST00000580330 88 ntBASIC2.06□□□□□ -2.08
TPM3P06753 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.06□□□□□ -2.08
TPM3P06753 AP003400.5-201ENST00000624827 617 ntBASIC2.06□□□□□ -2.08
TPM3P06753 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TPM3P06753 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TPM3P06753 RNU6-353P-201ENST00000364266 108 ntBASIC2.05□□□□□ -2.08
TPM3P06753 SNORD48-201ENST00000364953 64 ntBASIC2.05□□□□□ -2.08
TPM3P06753 MIR217-201ENST00000384817 110 ntBASIC2.05□□□□□ -2.08
TPM3P06753 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
TPM3P06753 RNU2-33P-201ENST00000410344 192 ntBASIC2.05□□□□□ -2.08
TPM3P06753 RNU2-20P-201ENST00000410425 191 ntBASIC2.05□□□□□ -2.08
TPM3P06753 AL355994.1-201ENST00000424379 260 ntBASIC2.05□□□□□ -2.08
TPM3P06753 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.05□□□□□ -2.08
TPM3P06753 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TPM3P06753 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 AL359212.1-201ENST00000556608 614 ntBASIC2.05□□□□□ -2.08
TPM3P06753 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.05□□□□□ -2.08
TPM3P06753 AC136601.2-201ENST00000604356 474 ntBASIC2.05□□□□□ -2.08
TPM3P06753 AC069294.1-201ENST00000608397 350 ntBASIC2.05□□□□□ -2.08
TPM3P06753 AL158801.5-201ENST00000623123 465 ntBASIC2.05□□□□□ -2.08
TPM3P06753 RNU6-492P-201ENST00000363035 104 ntBASIC2.04□□□□□ -2.08
TPM3P06753 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
TPM3P06753 RN7SKP158-201ENST00000410453 326 ntBASIC2.04□□□□□ -2.08
TPM3P06753 Z93242.1-201ENST00000427102 353 ntBASIC2.04□□□□□ -2.08
TPM3P06753 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.04□□□□□ -2.08
TPM3P06753 RPL30P4-201ENST00000429309 333 ntBASIC2.04□□□□□ -2.08
TPM3P06753 AC007919.1-201ENST00000429380 217 ntBASIC2.04□□□□□ -2.08
TPM3P06753 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.04□□□□□ -2.08
TPM3P06753 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.04□□□□□ -2.08
TPM3P06753 AC005297.2-201ENST00000450430 606 ntBASIC2.04□□□□□ -2.08
TPM3P06753 RPL12P25-201ENST00000455592 494 ntBASIC2.04□□□□□ -2.08
TPM3P06753 RPL21P99-201ENST00000480369 423 ntBASIC2.04□□□□□ -2.08
TPM3P06753 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.04□□□□□ -2.08
TPM3P06753 AC027309.2-201ENST00000520566 192 ntBASIC2.04□□□□□ -2.08
TPM3P06753 AC118273.2-201ENST00000532092 465 ntBASIC2.04□□□□□ -2.08
TPM3P06753 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
TPM3P06753 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.04□□□□□ -2.08
TPM3P06753 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
TPM3P06753 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.04□□□□□ -2.08
TPM3P06753 MTND1P37-201ENST00000636562 264 ntBASIC2.04□□□□□ -2.08
TPM3P06753 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TPM3P06753 SNORA64-201ENST00000384674 134 ntBASIC2.03□□□□□ -2.08
TPM3P06753 RPL23AP29-201ENST00000397284 453 ntBASIC2.03□□□□□ -2.08
TPM3P06753 AL356432.1-201ENST00000405809 419 ntBASIC2.03□□□□□ -2.08
TPM3P06753 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.03□□□□□ -2.08
TPM3P06753 AL158050.1-201ENST00000416077 457 ntBASIC2.03□□□□□ -2.08
TPM3P06753 BPY2DP-201ENST00000422208 265 ntBASIC2.03□□□□□ -2.08
TPM3P06753 AL121882.1-201ENST00000422893 417 ntBASIC2.03□□□□□ -2.08
TPM3P06753 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.03□□□□□ -2.08
TPM3P06753 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.03□□□□□ -2.08
TPM3P06753 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.03□□□□□ -2.08
TPM3P06753 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TPM3P06753 LTV1P1-201ENST00000510683 1237 ntBASIC2.03□□□□□ -2.08
TPM3P06753 AC107393.1-201ENST00000512403 346 ntBASIC2.03□□□□□ -2.08
TPM3P06753 SNORA76.2-201ENST00000517095 137 ntBASIC2.03□□□□□ -2.08
TPM3P06753 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
TPM3P06753 CBX3P7-201ENST00000532876 502 ntBASIC2.03□□□□□ -2.08
TPM3P06753 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.03□□□□□ -2.08
TPM3P06753 HSBP1P1-201ENST00000555205 166 ntBASIC2.03□□□□□ -2.08
TPM3P06753 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.03□□□□□ -2.08
TPM3P06753 AL391813.1-201ENST00000603098 260 ntBASIC2.03□□□□□ -2.08
TPM3P06753 AP003973.1-201ENST00000604639 691 ntBASIC2.03□□□□□ -2.08
TPM3P06753 KATNBL1P5-201ENST00000605015 517 ntBASIC2.03□□□□□ -2.08
TPM3P06753 AC106052.1-201ENST00000608029 497 ntBASIC2.03□□□□□ -2.08
TPM3P06753 AC012150.2-201ENST00000621300 544 ntBASIC2.03□□□□□ -2.08
TPM3P06753 ADAM3A-203ENST00000461344 2157 ntBASIC2.03□□□□□ -2.08
TPM3P06753 ZNF355P-201ENST00000427301 3216 ntBASIC2.03□□□□□ -2.08
TPM3P06753 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM3P06753 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM3P06753 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TPM3P06753 RPS20P15-201ENST00000412792 311 ntBASIC2.02□□□□□ -2.09
TPM3P06753 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM3P06753 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM3P06753 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
TPM3P06753 MTND3P4-201ENST00000453537 303 ntBASIC2.02□□□□□ -2.09
TPM3P06753 RPL23AP3-201ENST00000453844 468 ntBASIC2.02□□□□□ -2.09
TPM3P06753 snoU109.1-201ENST00000459339 135 ntBASIC2.02□□□□□ -2.09
TPM3P06753 RPS20P20-201ENST00000460498 340 ntBASIC2.02□□□□□ -2.09
TPM3P06753 BZW1P2-201ENST00000473537 826 ntBASIC2.02□□□□□ -2.09
TPM3P06753 RPS20P22-201ENST00000473700 357 ntBASIC2.02□□□□□ -2.09
TPM3P06753 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms