Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 OR5H15-201ENST00000383696 930 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 SNORA6-201ENST00000384033 151 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 RNU6-140P-201ENST00000384566 108 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 MIR620-201ENST00000385232 95 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 TXNP7-201ENST00000406296 293 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 UBE2FP1-201ENST00000416536 447 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.03□□□□□ -2.08
MT-ND4P03905 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.03□□□□□ -2.08
MT-ND4P03905 ZNF863P-201ENST00000426746 417 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.03□□□□□ -2.08
MT-ND4P03905 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.03□□□□□ -2.08
MT-ND4P03905 MTCO2P20-201ENST00000437339 673 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 TPT1P14-201ENST00000448018 505 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.03□□□□□ -2.08
MT-ND4P03905 RPL12P25-201ENST00000455592 494 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 RPS20P22-201ENST00000473700 357 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.03□□□□□ -2.08
MT-ND4P03905 AC010587.2-201ENST00000511727 448 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 RNA5SP320-201ENST00000516263 124 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AC023538.1-201ENST00000534576 736 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.03□□□□□ -2.08
MT-ND4P03905 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.03□□□□□ -2.08
MT-ND4P03905 AC087465.1-201ENST00000560574 245 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.03□□□□□ -2.08
MT-ND4P03905 AGGF1P5-201ENST00000567900 919 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 LARP7P3-201ENST00000579888 337 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.03□□□□□ -2.08
MT-ND4P03905 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.03□□□□□ -2.08
MT-ND4P03905 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.03□□□□□ -2.08
MT-ND4P03905 AC136601.2-201ENST00000604356 474 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 MTND4LP5-201ENST00000605152 292 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AC005014.3-201ENST00000605985 190 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
MT-ND4P03905 AC067747.1-201ENST00000608026 250 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 OR10AB1P-201ENST00000609613 938 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AL133445.2-201ENST00000611191 527 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 MIR7106-201ENST00000612419 65 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.03□□□□□ -2.08
MT-ND4P03905 AL445984.1-201ENST00000637834 659 ntBASIC2.03□□□□□ -2.08
MT-ND4P03905 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
MT-ND4P03905 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
MT-ND4P03905 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
MT-ND4P03905 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MT-ND4P03905 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
MT-ND4P03905 MTND4P35-201ENST00000604257 1375 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 RNU6-853P-201ENST00000364306 107 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 RNU6-432P-201ENST00000384196 109 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 MIR196B-201ENST00000384852 84 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 AC096664.2-201ENST00000411843 406 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.02□□□□□ -2.09
MT-ND4P03905 AL117351.1-201ENST00000438864 766 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 PGBD4P3-201ENST00000440731 581 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND4P03905 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MT-ND4P03905 MTCO1P27-201ENST00000448269 226 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AP000542.1-201ENST00000448473 371 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 PAXBP1P1-201ENST00000449315 447 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.02□□□□□ -2.09
MT-ND4P03905 MRPS17P3-201ENST00000465453 385 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC107626.1-201ENST00000471084 183 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 LINC00888-204ENST00000487386 421 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 RPS29P20-201ENST00000489592 171 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 RPS15AP36-201ENST00000492022 382 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 GZMAP1-201ENST00000503054 631 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 RNA5SP291-201ENST00000517222 105 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
MT-ND4P03905 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.02□□□□□ -2.09
MT-ND4P03905 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 RPS3AP23-202ENST00000574601 686 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND4P03905 MIR4509-3-201ENST00000578671 94 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 MIR4509-2-201ENST00000583920 94 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC002545.1-201ENST00000592511 181 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AL357094.1-201ENST00000603845 844 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC080013.3-201ENST00000606839 578 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 RNU4-5P-201ENST00000607255 135 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.02□□□□□ -2.09
MT-ND4P03905 FTX_3.1-201ENST00000610451 147 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC005332.10-201ENST00000612725 619 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 SDR42E1P2-201ENST00000614861 481 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND4P03905 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND4P03905 MIR4509-1-201ENST00000618224 94 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND4P03905 AC012640.5-201ENST00000623897 319 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AC099654.9-201ENST00000637055 678 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 MIR7515-201ENST00000637837 67 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 AP000776.1-201ENST00000530032 1663 ntBASIC2.02□□□□□ -2.09
MT-ND4P03905 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MT-ND4P03905 AC062016.1-201ENST00000355719 319 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 SNORA38-201ENST00000363946 132 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 SNORA51.11-201ENST00000384442 131 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms