Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
LDLRP01130 AL353777.1-201ENST00000425552 326 ntBASIC3.32□□□□□ -1.88
LDLRP01130 DUTP6-201ENST00000425573 462 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.32□□□□□ -1.88
LDLRP01130 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 USP12PX-201ENST00000432383 1057 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AC004866.2-201ENST00000438285 481 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AL049734.2-201ENST00000441066 616 ntBASIC3.32□□□□□ -1.88
LDLRP01130 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
LDLRP01130 MTND1P3-201ENST00000484956 952 ntBASIC3.32□□□□□ -1.88
LDLRP01130 LARP1BP2-201ENST00000486594 519 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 AC103843.2-201ENST00000530523 682 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.32□□□□□ -1.88
LDLRP01130 AP003122.4-201ENST00000530980 758 ntBASIC3.32□□□□□ -1.88
LDLRP01130 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.32□□□□□ -1.88
LDLRP01130 ANP32BP3-201ENST00000559213 706 ntBASIC3.32□□□□□ -1.88
LDLRP01130 HMGN1P30-201ENST00000589286 268 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AC012493.2-201ENST00000595083 291 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AC121334.2-201ENST00000605387 271 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AC007038.2-201ENST00000608095 740 ntBASIC3.32□□□□□ -1.88
LDLRP01130 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 AC009268.2-201ENST00000621925 457 ntBASIC3.32□□□□□ -1.88
LDLRP01130 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
LDLRP01130 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LDLRP01130 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDLRP01130 AC007823.1-201ENST00000569932 1566 ntBASIC3.32□□□□□ -1.88
LDLRP01130 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDLRP01130 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LDLRP01130 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 AC002546.1-201ENST00000588041 2504 ntBASIC3.32□□□□□ -1.88
LDLRP01130 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
LDLRP01130 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.31□□□□□ -1.88
LDLRP01130 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LDLRP01130 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDLRP01130 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
LDLRP01130 RNU6-173P-201ENST00000364215 104 ntBASIC3.31□□□□□ -1.88
LDLRP01130 RNY4P34-201ENST00000364779 95 ntBASIC3.31□□□□□ -1.88
LDLRP01130 Y_RNA.510-201ENST00000384511 114 ntBASIC3.31□□□□□ -1.88
LDLRP01130 MIR19A-201ENST00000384878 82 ntBASIC3.31□□□□□ -1.88
LDLRP01130 RPS3AP3-201ENST00000411933 242 ntBASIC3.31□□□□□ -1.88
LDLRP01130 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.31□□□□□ -1.88
LDLRP01130 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 RPL23AP82-202ENST00000427528 469 ntBASIC3.31□□□□□ -1.88
LDLRP01130 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.31□□□□□ -1.88
LDLRP01130 AC024082.2-201ENST00000434771 238 ntBASIC3.31□□□□□ -1.88
LDLRP01130 HIGD1AP11-201ENST00000438361 280 ntBASIC3.31□□□□□ -1.88
LDLRP01130 MTCO3P18-201ENST00000440206 761 ntBASIC3.31□□□□□ -1.88
LDLRP01130 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 snoU109.1-201ENST00000459339 135 ntBASIC3.31□□□□□ -1.88
LDLRP01130 CENPBD1P1-201ENST00000464061 469 ntBASIC3.31□□□□□ -1.88
LDLRP01130 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
LDLRP01130 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC135721.1-201ENST00000497954 479 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.31□□□□□ -1.88
LDLRP01130 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
LDLRP01130 SNORA20.3-201ENST00000516880 132 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC107934.2-201ENST00000518653 310 ntBASIC3.31□□□□□ -1.88
LDLRP01130 DEFB108D-201ENST00000527787 222 ntBASIC3.31□□□□□ -1.88
LDLRP01130 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
LDLRP01130 AC011611.1-201ENST00000552179 197 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 COX6CP3-201ENST00000580869 223 ntBASIC3.31□□□□□ -1.88
LDLRP01130 FGF7P1-201ENST00000582820 288 ntBASIC3.31□□□□□ -1.88
LDLRP01130 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.31□□□□□ -1.88
LDLRP01130 AL161729.4-201ENST00000604650 476 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC104458.1-201ENST00000608243 463 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC131902.3-201ENST00000611767 581 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC104260.1-201ENST00000616660 539 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC108479.2-201ENST00000617314 601 ntBASIC3.31□□□□□ -1.88
LDLRP01130 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LDLRP01130 AC007742.2-201ENST00000618226 398 ntBASIC3.31□□□□□ -1.88
LDLRP01130 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
LDLRP01130 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.31□□□□□ -1.88
LDLRP01130 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDLRP01130 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LDLRP01130 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LDLRP01130 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDLRP01130 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDLRP01130 AL354685.2-201ENST00000448218 1447 ntBASIC3.3□□□□□ -1.88
LDLRP01130 MTND4P23-201ENST00000447723 1363 ntBASIC3.3□□□□□ -1.88
LDLRP01130 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.3□□□□□ -1.88
LDLRP01130 Y_RNA.61-201ENST00000362835 102 ntBASIC3.3□□□□□ -1.88
LDLRP01130 RNU5E-8P-201ENST00000363502 116 ntBASIC3.3□□□□□ -1.88
LDLRP01130 RNY4P16-201ENST00000364768 94 ntBASIC3.3□□□□□ -1.88
LDLRP01130 Y_RNA.372-201ENST00000365599 102 ntBASIC3.3□□□□□ -1.88
LDLRP01130 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.3□□□□□ -1.88
LDLRP01130 DEFB109C-201ENST00000382575 264 ntBASIC3.3□□□□□ -1.88
LDLRP01130 DEFB109B-201ENST00000382656 264 ntBASIC3.3□□□□□ -1.88
LDLRP01130 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
LDLRP01130 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDLRP01130 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms