Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SNORA70.16-201ENST00000516390 95 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CTDNEP1O95476 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CTDNEP1O95476 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 MTATP6P24-201ENST00000576835 677 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 MIR3609-201ENST00000582661 80 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC234772.3-201ENST00000602277 528 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC012443.1-201ENST00000605605 231 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AL390208.1-201ENST00000605885 644 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC245297.2-201ENST00000610119 565 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC097478.2-201ENST00000610572 514 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC245517.5-201ENST00000611529 162 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 MIR6873-201ENST00000622788 63 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC231657.1-201ENST00000624313 397 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC064859.1-201ENST00000624741 174 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AL390862.1-201ENST00000635467 1469 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 RPS24P7-201ENST00000416921 246 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 TXNL1P1-201ENST00000429528 554 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AL445646.1-201ENST00000431784 216 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AL139415.2-201ENST00000431968 163 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 NDUFB4P6-201ENST00000436819 366 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 FAM103A2P-201ENST00000444122 354 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 Z82190.1-201ENST00000454534 490 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC010099.1-201ENST00000455434 375 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC106872.3-201ENST00000495104 446 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC006390.1-201ENST00000508068 283 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC118465.1-201ENST00000513820 1271 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 RNU6-150P-201ENST00000516237 95 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 RNU5A-4P-201ENST00000516588 111 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 EEF1A1P37-201ENST00000522748 715 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC022861.1-201ENST00000522981 663 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 SETP7-201ENST00000552169 453 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC009712.1-201ENST00000564938 316 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC025588.2-201ENST00000604851 466 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC013244.3-201ENST00000605614 388 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AP002826.1-201ENST00000608835 315 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CTDNEP1O95476 AL079343.1-201ENST00000572358 1771 ntBASIC2.35□□□□□ -2.03
CTDNEP1O95476 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CTDNEP1O95476 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 FAM133CP-201ENST00000332869 704 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 USP9YP33-201ENST00000412220 421 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 HMGB1P49-201ENST00000418882 569 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 XKRYP1-201ENST00000423438 492 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC019178.2-201ENST00000423595 505 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 ZYG11AP1-201ENST00000430329 837 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 XKRYP2-201ENST00000432915 492 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 USP9YP35-201ENST00000435696 412 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AL117351.1-201ENST00000438864 766 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 MTND5P14-201ENST00000441481 1267 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC092798.1-201ENST00000458542 409 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 SNORA59A-201ENST00000459326 152 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 HMGB1P36-201ENST00000487709 576 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 MTAPP1-201ENST00000489154 819 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 MTCYBP35-201ENST00000503630 1137 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC147055.4-201ENST00000504399 745 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 COX7A2P2-201ENST00000505291 250 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC034244.1-201ENST00000507687 207 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC017037.2-201ENST00000513850 890 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC087465.1-201ENST00000560574 245 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC009314.1-201ENST00000603871 304 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC112220.3-201ENST00000605502 502 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms