Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU1-108P-201ENST00000362556 161 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RNU6-511P-201ENST00000363496 107 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RNU5E-8P-201ENST00000363502 116 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RNU6-1155P-201ENST00000363554 107 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AL109755.1-201ENST00000401791 649 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RNU4-65P-201ENST00000410473 140 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RNU6-712P-201ENST00000410558 100 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RN7SKP220-201ENST00000410611 288 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 AC099677.1-201ENST00000420575 175 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 AL109913.1-201ENST00000421173 514 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 DDX3P2-201ENST00000446138 111 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 FDX1P2-201ENST00000450769 375 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 RNU6-420P-201ENST00000458780 107 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RPS29P25-201ENST00000481709 171 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 RPS3AP50-201ENST00000487064 803 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAPGEF3O95398 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 DEFB108D-201ENST00000527787 222 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AC018630.1-201ENST00000541376 925 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AC128657.1-201ENST00000549459 145 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AC025253.1-201ENST00000613623 543 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAPGEF3O95398 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.87□□□□□ -1.63
RAPGEF3O95398 ZNF680P1-201ENST00000436625 1469 ntBASIC4.87□□□□□ -1.63
RAPGEF3O95398 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC068647.1-201ENST00000489539 2265 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC087190.4-201ENST00000574616 8334 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RAPGEF3O95398 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAPGEF3O95398 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 OR56A5-201ENST00000340110 738 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 RNA5SP52-201ENST00000362448 134 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 Y_RNA.303-201ENST00000364998 94 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 RNU6-74P-201ENST00000384235 107 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 RNU6-606P-201ENST00000384721 111 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 MIR558-201ENST00000384920 94 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AL583834.1-201ENST00000406943 343 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 HSPE1P8-201ENST00000406997 288 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 RNU6-908P-201ENST00000410160 94 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 RNA5SP146-201ENST00000410743 123 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 RPL30P16-201ENST00000419341 429 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 MED13P1-201ENST00000428342 171 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 RPS20P5-201ENST00000434808 360 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 SEPT14P3-201ENST00000439401 183 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AL732372.2-207ENST00000445840 183 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 SEPT14P2-201ENST00000453405 183 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC069439.1-201ENST00000494739 167 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 SEPT14P4-201ENST00000513445 186 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 RNU7-51P-201ENST00000516560 62 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 FO082796.1-201ENST00000523795 183 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 AC012669.1-201ENST00000603209 283 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 AL157817.1-201ENST00000614264 790 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 FRG1KP-201ENST00000623592 341 ntBASIC4.86□□□□□ -1.63
RAPGEF3O95398 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAPGEF3O95398 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RAPGEF3O95398 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RAPGEF3O95398 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RAPGEF3O95398 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAPGEF3O95398 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 CKAP2P1-201ENST00000555477 2049 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAPGEF3O95398 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC062016.1-201ENST00000355719 319 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC138393.2-201ENST00000414742 246 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAPGEF3O95398 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 RPL23AP30-201ENST00000432419 501 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 ATP5HP2-201ENST00000433885 485 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC005094.1-201ENST00000440420 368 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 AL356010.1-201ENST00000456364 102 ntBASIC4.85□□□□□ -1.63
RAPGEF3O95398 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.85□□□□□ -1.63
RAPGEF3O95398 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms