Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 Y_RNA.395-201ENST00000383945 109 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 SDHCP2-201ENST00000398565 501 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 AL590632.1-201ENST00000424289 371 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 AL356867.1-201ENST00000429623 299 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF40AO75400 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40AO75400 FGF7P3-201ENST00000454645 303 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 MTCO3P10-201ENST00000455912 772 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF40AO75400 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40AO75400 AC096745.1-201ENST00000509945 370 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 SCARNA15.2-201ENST00000516409 127 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 RNA5SP471-201ENST00000516971 106 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF40AO75400 SNRPGP18-201ENST00000553000 214 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF40AO75400 RN7SL690P-201ENST00000582087 240 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF40AO75400 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40AO75400 AC073539.2-201ENST00000597113 165 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 AL355802.3-201ENST00000607571 545 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF40AO75400 MIR6891-201ENST00000618788 93 ntBASIC5.05□□□□□ -1.6
PRPF40AO75400 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PRPF40AO75400 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PRPF40AO75400 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF40AO75400 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF40AO75400 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF40AO75400 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF40AO75400 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PRPF40AO75400 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 KPNA2P1-201ENST00000458289 1591 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
PRPF40AO75400 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC027290.2-201ENST00000623210 18662 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF40AO75400 SNORA33.2-201ENST00000365413 134 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 RNU6-1279P-201ENST00000383917 103 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 RNU6-738P-201ENST00000384531 106 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 MIR578-201ENST00000384828 96 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 MIR301A-201ENST00000385261 86 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 MIR1290-201ENST00000408735 78 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 RNA5SP306-201ENST00000411087 107 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 RPL7P37-201ENST00000425095 738 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 TXNP1-201ENST00000441872 371 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AL451050.1-201ENST00000450126 415 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PRPF40AO75400 RNU7-138P-201ENST00000459479 64 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 RN7SL585P-201ENST00000470538 280 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 AC025554.1-201ENST00000505641 188 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40AO75400 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF40AO75400 RNU6-1213P-201ENST00000517075 94 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40AO75400 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC098826.3-201ENST00000603823 466 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 AC008745.1-201ENST00000604064 271 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF40AO75400 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PRPF40AO75400 AC007823.1-201ENST00000569932 1566 ntBASIC5.04□□□□□ -1.6
PRPF40AO75400 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PRPF40AO75400 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40AO75400 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF40AO75400 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40AO75400 RNU6-1160P-201ENST00000384546 104 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 RNU6-310P-201ENST00000384655 107 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 RNU6-293P-201ENST00000411259 106 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 FAR2P2-201ENST00000413041 594 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 RPL31P12-201ENST00000422587 358 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF40AO75400 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF40AO75400 AL360271.2-201ENST00000447710 161 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF40AO75400 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.03□□□□□ -1.6
PRPF40AO75400 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF40AO75400 AC017037.1-201ENST00000508460 471 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 MTND3P25-201ENST00000509243 135 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF40AO75400 Y_RNA.708-201ENST00000516950 96 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 RNU6-1315P-201ENST00000517187 99 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF40AO75400 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF40AO75400 NUTF2P8-201ENST00000604593 363 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 AC019193.3-201ENST00000609144 554 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 AL355810.1-201ENST00000614629 552 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms