Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 TMSB4XP1-201ENST00000424567 135 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.39□□□□□ -2.03
NPHP4O75161 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.39□□□□□ -2.03
NPHP4O75161 MRPL42P4-201ENST00000453267 443 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 Z82190.1-201ENST00000454534 490 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.39□□□□□ -2.03
NPHP4O75161 RPL30P14-201ENST00000482744 348 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NPHP4O75161 OR4K8P-201ENST00000578842 1048 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 AC091946.2-201ENST00000606105 291 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 MIR6076-201ENST00000617521 113 ntBASIC2.39□□□□□ -2.03
NPHP4O75161 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.39□□□□□ -2.03
NPHP4O75161 AL513185.3-201ENST00000433335 1300 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.38□□□□□ -2.03
NPHP4O75161 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.38□□□□□ -2.03
NPHP4O75161 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPHP4O75161 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NPHP4O75161 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NPHP4O75161 RNU6-1155P-201ENST00000363554 107 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 RNU6-799P-201ENST00000363567 107 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 SNORA7.1-201ENST00000363750 139 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 RNU1-42P-201ENST00000364033 160 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 RNU6-60P-201ENST00000364792 103 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 RNA5SP138-201ENST00000365098 114 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AL603865.2-201ENST00000401679 213 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AL136372.1-201ENST00000403060 228 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AL512637.2-201ENST00000431287 1256 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AC244505.5-201ENST00000443639 207 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 SNRPGP6-201ENST00000451124 220 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 RPL37P25-201ENST00000507308 276 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP4O75161 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.38□□□□□ -2.03
NPHP4O75161 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NPHP4O75161 AC121758.2-201ENST00000553271 193 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP4O75161 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP4O75161 PSMA3P-201ENST00000555485 635 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 MIR4421-201ENST00000578133 69 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP4O75161 MIR4666A-201ENST00000580160 79 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AL121917.1-203ENST00000605534 577 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AC012443.1-201ENST00000605605 231 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 OR10AB1P-201ENST00000609613 938 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 RMST_6.1-201ENST00000611980 203 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AC073592.7-201ENST00000623659 507 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.38□□□□□ -2.03
NPHP4O75161 AL356094.1-201ENST00000624663 1212 ntBASIC2.38□□□□□ -2.03
NPHP4O75161 AC008568.2-201ENST00000623862 2313 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
NPHP4O75161 RNA5SP393-201ENST00000363423 117 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 SNORD114-26-201ENST00000363543 72 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 RNU6-173P-201ENST00000364215 104 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 SNORA16.1-201ENST00000364597 132 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 RNU6-53P-201ENST00000365367 106 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 SNORD114-22-201ENST00000365423 72 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 RNU6-468P-201ENST00000384003 109 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 AL355615.1-201ENST00000406187 641 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.37□□□□□ -2.03
NPHP4O75161 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.37□□□□□ -2.03
NPHP4O75161 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.37□□□□□ -2.03
NPHP4O75161 Z96811.1-201ENST00000445880 108 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 AL590664.1-201ENST00000448065 339 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.37□□□□□ -2.03
NPHP4O75161 RFC5P1-201ENST00000454419 874 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 RPL31P60-201ENST00000478450 367 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 HMGN1P7-201ENST00000491722 313 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 AC093510.2-201ENST00000562820 896 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 AL583856.2-201ENST00000606298 543 ntBASIC2.37□□□□□ -2.03
NPHP4O75161 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.37□□□□□ -2.03
NPHP4O75161 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPHP4O75161 RNU5D-1-201ENST00000363299 116 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 RNA5SP325-201ENST00000363756 130 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NPHP4O75161 MIR135A2-201ENST00000384854 100 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 RNU6-174P-201ENST00000410406 106 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 AC093155.1-201ENST00000440164 826 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.36□□□□□ -2.03
NPHP4O75161 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP4O75161 SNORD53B-201ENST00000577887 78 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.36□□□□□ -2.03
NPHP4O75161 MIR4448-201ENST00000584360 86 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 DUXAP4-201ENST00000603046 613 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 AC024560.3-201ENST00000608482 349 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 AL356585.4-201ENST00000623078 1229 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 U6.101-201ENST00000637707 76 ntBASIC2.36□□□□□ -2.03
NPHP4O75161 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.36□□□□□ -2.03
NPHP4O75161 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.36□□□□□ -2.03
NPHP4O75161 RNU6-882P-201ENST00000391025 103 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 RNU6-1300P-201ENST00000391046 108 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 FO393413.1-201ENST00000402892 195 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 BTF3P8-201ENST00000414577 526 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms