Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.8□□□□□ -1.64
CPNE3O75131 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPNE3O75131 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPNE3O75131 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.79□□□□□ -1.64
CPNE3O75131 MTND5P9-201ENST00000503854 1755 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CPNE3O75131 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CPNE3O75131 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPNE3O75131 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CPNE3O75131 DEFB109C-201ENST00000382575 264 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 DEFB109B-201ENST00000382656 264 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 RNU6-741P-201ENST00000383889 107 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 SNORA2.3-201ENST00000383920 135 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 SNORA51.11-201ENST00000384442 131 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 Y_RNA.551-201ENST00000384661 102 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 AC007098.1-201ENST00000420122 367 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 EIF4EP2-201ENST00000422816 654 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.79□□□□□ -1.64
CPNE3O75131 PIGFP3-201ENST00000441918 722 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CPNE3O75131 KC877373.1-201ENST00000479066 408 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.79□□□□□ -1.64
CPNE3O75131 SNORA31.8-201ENST00000516327 108 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.79□□□□□ -1.64
CPNE3O75131 IGHV3-76-201ENST00000522465 295 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CPNE3O75131 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.79□□□□□ -1.64
CPNE3O75131 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CPNE3O75131 AC103996.1-201ENST00000555468 102 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.79□□□□□ -1.64
CPNE3O75131 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.79□□□□□ -1.64
CPNE3O75131 AC005357.1-201ENST00000588399 301 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 AC125232.2-201ENST00000592457 143 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 AC078899.3-201ENST00000599065 212 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 AL645944.1-201ENST00000603857 493 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.79□□□□□ -1.64
CPNE3O75131 AC006023.2-201ENST00000609916 167 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 MIR8076-201ENST00000611401 83 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 AL161629.2-201ENST00000615347 275 ntBASIC4.79□□□□□ -1.64
CPNE3O75131 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPNE3O75131 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CPNE3O75131 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.79□□□□□ -1.64
CPNE3O75131 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPNE3O75131 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.79□□□□□ -1.64
CPNE3O75131 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.78□□□□□ -1.64
CPNE3O75131 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.78□□□□□ -1.64
CPNE3O75131 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPNE3O75131 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CPNE3O75131 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.78□□□□□ -1.64
CPNE3O75131 SDAD1P1-202ENST00000524156 2051 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CPNE3O75131 RN7SKP227-201ENST00000364445 330 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 Y_RNA.276-201ENST00000364732 109 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 Y_RNA.461-201ENST00000384263 103 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 RNU6-700P-201ENST00000391043 107 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 SAR1AP2-201ENST00000392696 594 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPNE3O75131 AL356968.1-201ENST00000416622 474 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 AL117339.3-201ENST00000418733 162 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.78□□□□□ -1.64
CPNE3O75131 AC007560.1-201ENST00000426912 237 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 AL590383.1-201ENST00000428602 75 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 AC009238.2-201ENST00000431026 355 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.78□□□□□ -1.64
CPNE3O75131 AK3P2-201ENST00000507976 429 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.78□□□□□ -1.64
CPNE3O75131 RNU6-408P-201ENST00000515910 100 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 SNORA31.19-201ENST00000517079 126 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 AL049839.1-201ENST00000556151 657 ntBASIC4.78□□□□□ -1.64
CPNE3O75131 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.78□□□□□ -1.64
CPNE3O75131 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CPNE3O75131 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CPNE3O75131 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CPNE3O75131 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPNE3O75131 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.78□□□□□ -1.64
CPNE3O75131 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
CPNE3O75131 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.77□□□□□ -1.65
CPNE3O75131 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CPNE3O75131 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CPNE3O75131 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CPNE3O75131 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CPNE3O75131 RNU6-595P-201ENST00000363944 107 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 MIR34A-201ENST00000385130 110 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 SNORA40C-201ENST00000391285 128 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.77□□□□□ -1.65
CPNE3O75131 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.77□□□□□ -1.65
CPNE3O75131 AC139453.3-201ENST00000493276 369 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 RNU2-53P-201ENST00000516257 147 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 SNORA70.16-201ENST00000516390 95 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 RNA5SP165-201ENST00000517142 115 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 AC109479.2-201ENST00000517842 174 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.77□□□□□ -1.65
CPNE3O75131 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.77□□□□□ -1.65
CPNE3O75131 BNIP3P1-201ENST00000547295 580 ntBASIC4.77□□□□□ -1.65
CPNE3O75131 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms