Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CR383656.1-201ENST00000484916 377 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 RPL22P13-201ENST00000493291 347 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCD1O75127 RNA5SP446-201ENST00000515955 82 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCD1O75127 AC022882.1-201ENST00000532142 501 ntBASIC5.54□□□□□ -1.52
PTCD1O75127 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCD1O75127 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PTCD1O75127 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PTCD1O75127 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCD1O75127 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PTCD1O75127 FAM91A3P-201ENST00000456826 2544 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
PTCD1O75127 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCD1O75127 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 Y_RNA.252-201ENST00000364556 101 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 RNU6-214P-201ENST00000384130 107 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 RNU6-14P-201ENST00000384630 106 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 RNU6-837P-201ENST00000391056 108 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 HMGB1P9-201ENST00000429856 646 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCD1O75127 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 AC090602.1-201ENST00000469695 252 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCD1O75127 AC096745.1-201ENST00000509945 370 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCD1O75127 MTND1P19-201ENST00000511780 315 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 AC021146.3-201ENST00000511911 260 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 AL137100.2-201ENST00000555786 315 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 RN7SL703P-201ENST00000578485 302 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 AC053481.4-201ENST00000583164 216 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 AC012119.1-201ENST00000603184 222 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 AC112200.1-201ENST00000625015 234 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 AL133243.3-201ENST00000617415 3004 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCD1O75127 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PTCD1O75127 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCD1O75127 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 OR51H2P-202ENST00000641424 3046 ntBASIC5.53□□□□□ -1.52
PTCD1O75127 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCD1O75127 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PTCD1O75127 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCD1O75127 RNU6-450P-201ENST00000364654 107 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 SNORA62.3-201ENST00000365110 153 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 RNU6-472P-201ENST00000384299 107 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 RNU6-45P-201ENST00000384471 107 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 RPL7AP73-201ENST00000413490 353 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCD1O75127 AL359672.1-201ENST00000442302 409 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 RPL7L1P1-201ENST00000448259 785 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 AC015911.1-201ENST00000495111 156 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 GZMAP1-201ENST00000503054 631 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 AL592156.1-201ENST00000508758 304 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCD1O75127 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCD1O75127 MIR4458-201ENST00000578872 75 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 RPL7P50-201ENST00000600588 727 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 MIR4275-201ENST00000636486 87 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 AC090971.4-201ENST00000560291 1800 ntBASIC5.52□□□□□ -1.53
PTCD1O75127 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PTCD1O75127 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PTCD1O75127 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCD1O75127 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCD1O75127 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTCD1O75127 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTCD1O75127 SNORD62.1-201ENST00000362541 86 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTCD1O75127 AL590704.1-201ENST00000402856 794 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 AL451062.2-201ENST00000427515 271 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 HMGB1P27-201ENST00000431429 603 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 AC146944.2-203ENST00000502493 354 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 AC139495.1-202ENST00000513164 354 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 GMPSP1-201ENST00000514075 579 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 RNU6-408P-201ENST00000515910 100 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 RNU6-470P-201ENST00000515954 104 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 RNU6-699P-201ENST00000517081 110 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCD1O75127 AC023157.2-201ENST00000540596 141 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCD1O75127 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCD1O75127 MIR4444-1-201ENST00000581696 74 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 MIR4444-2-201ENST00000584390 74 ntBASIC5.51□□□□□ -1.53
PTCD1O75127 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCD1O75127 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCD1O75127 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCD1O75127 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCD1O75127 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCD1O75127 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCD1O75127 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
PTCD1O75127 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms