Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC078899.2-201ENST00000595282 212 ntBASIC1.69□□□□□ -2.14
SSNA1O43805 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.69□□□□□ -2.14
SSNA1O43805 AL139344.1-201ENST00000605228 195 ntBASIC1.69□□□□□ -2.14
SSNA1O43805 AC003001.2-201ENST00000616294 831 ntBASIC1.69□□□□□ -2.14
SSNA1O43805 AC109809.1-201ENST00000619665 545 ntBASIC1.69□□□□□ -2.14
SSNA1O43805 AC012314.7-201ENST00000619693 93 ntBASIC1.69□□□□□ -2.14
SSNA1O43805 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.69□□□□□ -2.14
SSNA1O43805 AL157770.1-201ENST00000623049 439 ntBASIC1.69□□□□□ -2.14
SSNA1O43805 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SSNA1O43805 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SSNA1O43805 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
SSNA1O43805 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SSNA1O43805 RNU6-1159P-201ENST00000362933 107 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 RNA5SP479-201ENST00000364858 117 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SSNA1O43805 CCNG1P1-201ENST00000406783 885 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 MTCYBP38-201ENST00000417160 1123 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.68□□□□□ -2.14
SSNA1O43805 FO393414.1-201ENST00000428697 1184 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AC010153.1-201ENST00000432862 727 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 RPL35AP22-201ENST00000436855 335 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AL353689.1-201ENST00000438895 199 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.68□□□□□ -2.14
SSNA1O43805 RPL23AP3-201ENST00000453844 468 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.68□□□□□ -2.14
SSNA1O43805 BX510359.1-201ENST00000456973 237 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 RN7SL636P-201ENST00000497504 294 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.68□□□□□ -2.14
SSNA1O43805 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.68□□□□□ -2.14
SSNA1O43805 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SSNA1O43805 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.68□□□□□ -2.14
SSNA1O43805 SNORD19.2-201ENST00000516978 73 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.68□□□□□ -2.14
SSNA1O43805 NACAP3-201ENST00000552100 481 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 MIR3167-201ENST00000579623 85 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 ELOCP29-201ENST00000588193 334 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AP001269.3-201ENST00000588718 329 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 VN1R90P-201ENST00000595717 726 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AC243773.3-201ENST00000613270 256 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 OR1S1-201ENST00000624470 978 ntBASIC1.68□□□□□ -2.14
SSNA1O43805 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.68□□□□□ -2.14
SSNA1O43805 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SSNA1O43805 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.67□□□□□ -2.14
SSNA1O43805 RNU6-748P-201ENST00000384648 107 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 MIR196B-201ENST00000384852 84 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 RPL22P22-201ENST00000395439 379 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AL356421.1-201ENST00000403255 413 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 GSTA9P-201ENST00000406231 611 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AIMP1P2-201ENST00000425294 312 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.67□□□□□ -2.14
SSNA1O43805 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.67□□□□□ -2.14
SSNA1O43805 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.67□□□□□ -2.14
SSNA1O43805 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.67□□□□□ -2.14
SSNA1O43805 RPL21P133-201ENST00000443666 476 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 MOB1AP2-201ENST00000446060 614 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.67□□□□□ -2.14
SSNA1O43805 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.67□□□□□ -2.14
SSNA1O43805 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SSNA1O43805 AL136380.1-201ENST00000447970 162 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 CECR9-201ENST00000453421 199 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.67□□□□□ -2.14
SSNA1O43805 AP001324.2-201ENST00000461163 319 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.67□□□□□ -2.14
SSNA1O43805 RPL23AP41-201ENST00000484754 458 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AC114981.1-201ENST00000503897 678 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.67□□□□□ -2.14
SSNA1O43805 MRPS33P3-201ENST00000513456 322 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 SMURF2P1-201ENST00000514992 481 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 RNU1-103P-201ENST00000516502 125 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.67□□□□□ -2.14
SSNA1O43805 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.67□□□□□ -2.14
SSNA1O43805 AC006199.1-201ENST00000548728 219 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AC021739.1-201ENST00000559631 174 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.67□□□□□ -2.14
SSNA1O43805 AC091152.3-201ENST00000604227 325 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 uc_338.14-201ENST00000613162 166 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SSNA1O43805 AL158801.5-201ENST00000623123 465 ntBASIC1.67□□□□□ -2.14
SSNA1O43805 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SSNA1O43805 ADAM3A-203ENST00000461344 2157 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AC107982.1-201ENST00000507171 1300 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SSNA1O43805 RNU5B-1-201ENST00000363286 116 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 RNU6-354P-201ENST00000383862 107 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 RNU6-610P-201ENST00000384264 107 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 HMGN2P39-201ENST00000398005 273 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 TPMTP2-201ENST00000414372 726 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 RPL26P27-201ENST00000414397 437 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 MTND1P28-201ENST00000435623 950 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.66□□□□□ -2.14
SSNA1O43805 PTGES3P1-201ENST00000439531 483 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AL500527.1-201ENST00000448532 255 ntBASIC1.66□□□□□ -2.14
SSNA1O43805 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.66□□□□□ -2.14
SSNA1O43805 PPP1R2P5-201ENST00000457256 603 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms