Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL158823.1-201ENST00000418441 478 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB3O15347 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.48□□□□□ -2.17
HMGB3O15347 VN1R42P-201ENST00000424651 344 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AC008850.1-201ENST00000427546 362 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AL590233.1-201ENST00000430017 456 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB3O15347 DNAJC19P4-201ENST00000440115 345 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB3O15347 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB3O15347 RPS20P20-201ENST00000460498 340 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 RPS20P22-201ENST00000473700 357 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AC013828.1-201ENST00000481845 158 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 RNA5SP137-201ENST00000516833 135 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 SNORA31.23-201ENST00000517219 133 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.48□□□□□ -2.17
HMGB3O15347 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGB3O15347 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGB3O15347 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HMGB3O15347 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB3O15347 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 HSBP1P1-201ENST00000555205 166 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 LINC00933-203ENST00000559812 219 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB3O15347 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGB3O15347 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGB3O15347 AC243960.4-201ENST00000600532 288 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGB3O15347 AP000238.1-201ENST00000608759 426 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AC020658.4-201ENST00000613987 684 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 AC104820.1-201ENST00000624183 307 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 OR1S1-201ENST00000624470 978 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGB3O15347 U6.101-201ENST00000637707 76 ntBASIC1.48□□□□□ -2.17
HMGB3O15347 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGB3O15347 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMGB3O15347 ELF2P3-201ENST00000445099 1506 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 ADAM3A-203ENST00000461344 2157 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 RNA5SP363-201ENST00000365072 115 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGB3O15347 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
HMGB3O15347 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC068050.1-201ENST00000394891 380 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AL133264.1-201ENST00000407157 562 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 RPS20P15-201ENST00000412792 311 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGB3O15347 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGB3O15347 SFR1P2-201ENST00000421841 730 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC007919.1-201ENST00000429380 217 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 ZYG11AP1-201ENST00000430329 837 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGB3O15347 RPL23AP6-201ENST00000446637 472 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 MTCO3P11-201ENST00000455103 774 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 GTF2IP12-201ENST00000456547 356 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC087884.1-201ENST00000469738 328 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 SETP6-201ENST00000479329 568 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC079203.1-201ENST00000487972 404 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 RPS27AP10-201ENST00000496103 208 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGB3O15347 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGB3O15347 MIR3126-201ENST00000577443 74 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC005229.3-201ENST00000603438 323 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC091946.2-201ENST00000606105 291 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC026790.2-201ENST00000606282 430 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 MIR92B-201ENST00000607575 96 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 AC008443.7-201ENST00000622195 246 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGB3O15347 MIR4275-201ENST00000636486 87 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 MIR219B-201ENST00000637023 88 ntBASIC1.47□□□□□ -2.17
HMGB3O15347 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGB3O15347 XGY1-201ENST00000381172 446 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 RNU6-748P-201ENST00000384648 107 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 RN7SKP32-201ENST00000410167 303 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 RNA5SP450-201ENST00000411206 102 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 USP9YP19-201ENST00000412165 485 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 USP9YP13-201ENST00000417797 480 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGB3O15347 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGB3O15347 HSPE1P21-201ENST00000438283 308 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 VN1R10P-201ENST00000447106 875 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HMGB3O15347 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HMGB3O15347 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGB3O15347 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGB3O15347 AC021146.2-201ENST00000504736 556 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGB3O15347 MRPS33P3-201ENST00000513456 322 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 RNU6-528P-201ENST00000516926 100 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 NRON-201ENST00000517270 370 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGB3O15347 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGB3O15347 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGB3O15347 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.46□□□□□ -2.18
HMGB3O15347 MIR4419B-201ENST00000577260 68 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 MIR4765-201ENST00000585007 77 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 AL138963.2-201ENST00000605137 226 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 AC009233.1-201ENST00000616477 371 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 AL603758.1-201ENST00000618654 241 ntBASIC1.46□□□□□ -2.18
HMGB3O15347 AP003485.2-201ENST00000623636 610 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms