Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
CUX2O14529 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CUX2O14529 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CUX2O14529 RNA5SP295-201ENST00000362655 121 ntBASIC3.26□□□□□ -1.89
CUX2O14529 RNU6-216P-201ENST00000363282 104 ntBASIC3.26□□□□□ -1.89
CUX2O14529 snoZ40.1-201ENST00000364540 72 ntBASIC3.26□□□□□ -1.89
CUX2O14529 MIR506-201ENST00000384998 124 ntBASIC3.26□□□□□ -1.89
CUX2O14529 U3.29-201ENST00000391296 212 ntBASIC3.26□□□□□ -1.89
CUX2O14529 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CUX2O14529 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.26□□□□□ -1.89
CUX2O14529 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.26□□□□□ -1.89
CUX2O14529 AC099677.1-201ENST00000420575 175 ntBASIC3.26□□□□□ -1.89
CUX2O14529 GTF2IP7-202ENST00000436677 309 ntBASIC3.26□□□□□ -1.89
CUX2O14529 AC092427.1-201ENST00000439177 601 ntBASIC3.26□□□□□ -1.89
CUX2O14529 HSPE1P28-201ENST00000443139 211 ntBASIC3.26□□□□□ -1.89
CUX2O14529 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CUX2O14529 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CUX2O14529 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.26□□□□□ -1.89
CUX2O14529 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.26□□□□□ -1.89
CUX2O14529 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.26□□□□□ -1.89
CUX2O14529 MIR5089-201ENST00000580047 84 ntBASIC3.26□□□□□ -1.89
CUX2O14529 AC103987.3-201ENST00000582071 292 ntBASIC3.26□□□□□ -1.89
CUX2O14529 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.26□□□□□ -1.89
CUX2O14529 AC012669.1-201ENST00000603209 283 ntBASIC3.26□□□□□ -1.89
CUX2O14529 AC004987.4-201ENST00000603383 338 ntBASIC3.26□□□□□ -1.89
CUX2O14529 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CUX2O14529 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CUX2O14529 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CUX2O14529 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CUX2O14529 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CUX2O14529 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.25□□□□□ -1.89
CUX2O14529 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.25□□□□□ -1.89
CUX2O14529 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CUX2O14529 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.25□□□□□ -1.89
CUX2O14529 GZMAP1-201ENST00000503054 631 ntBASIC3.25□□□□□ -1.89
CUX2O14529 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.25□□□□□ -1.89
CUX2O14529 COX7A2P2-201ENST00000505291 250 ntBASIC3.25□□□□□ -1.89
CUX2O14529 AC113347.3-201ENST00000509113 148 ntBASIC3.25□□□□□ -1.89
CUX2O14529 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.25□□□□□ -1.89
CUX2O14529 AC010265.1-201ENST00000513509 211 ntBASIC3.25□□□□□ -1.89
CUX2O14529 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.25□□□□□ -1.89
CUX2O14529 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.25□□□□□ -1.89
CUX2O14529 AC010738.1-201ENST00000604970 987 ntBASIC3.25□□□□□ -1.89
CUX2O14529 VIS1.1-201ENST00000610517 203 ntBASIC3.25□□□□□ -1.89
CUX2O14529 AC024257.5-201ENST00000612739 531 ntBASIC3.25□□□□□ -1.89
CUX2O14529 AC104763.3-201ENST00000613765 618 ntBASIC3.25□□□□□ -1.89
CUX2O14529 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.25□□□□□ -1.89
CUX2O14529 AC004808.1-201ENST00000627671 721 ntBASIC3.25□□□□□ -1.89
CUX2O14529 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CUX2O14529 AL353746.1-201ENST00000566293 6881 ntBASIC3.24□□□□□ -1.89
CUX2O14529 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CUX2O14529 SNORD116-12-201ENST00000384468 92 ntBASIC3.24□□□□□ -1.89
CUX2O14529 AP000567.1-201ENST00000406413 156 ntBASIC3.24□□□□□ -1.89
CUX2O14529 RNU2-47P-201ENST00000410649 186 ntBASIC3.24□□□□□ -1.89
CUX2O14529 AL449283.1-202ENST00000418249 604 ntBASIC3.24□□□□□ -1.89
CUX2O14529 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.24□□□□□ -1.89
CUX2O14529 RABEPKP1-201ENST00000440529 1026 ntBASIC3.24□□□□□ -1.89
CUX2O14529 KATNBL1P3-201ENST00000443475 909 ntBASIC3.24□□□□□ -1.89
CUX2O14529 RPL39P6-201ENST00000448289 150 ntBASIC3.24□□□□□ -1.89
CUX2O14529 OFD1P3Y-201ENST00000453312 783 ntBASIC3.24□□□□□ -1.89
CUX2O14529 MTND2P39-201ENST00000457230 764 ntBASIC3.24□□□□□ -1.89
CUX2O14529 snoU109.3-201ENST00000459477 145 ntBASIC3.24□□□□□ -1.89
CUX2O14529 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.24□□□□□ -1.89
CUX2O14529 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.24□□□□□ -1.89
CUX2O14529 SNRPGP16-201ENST00000533275 226 ntBASIC3.24□□□□□ -1.89
CUX2O14529 LARP7P2-201ENST00000575306 125 ntBASIC3.24□□□□□ -1.89
CUX2O14529 AP001330.4-201ENST00000604350 154 ntBASIC3.24□□□□□ -1.89
CUX2O14529 AC024060.1-201ENST00000607052 494 ntBASIC3.24□□□□□ -1.89
CUX2O14529 AC095031.1-201ENST00000623685 672 ntBASIC3.24□□□□□ -1.89
CUX2O14529 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CUX2O14529 SNRPEP3-201ENST00000338402 276 ntBASIC3.23□□□□□ -1.89
CUX2O14529 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CUX2O14529 AL161449.1-201ENST00000414531 1199 ntBASIC3.23□□□□□ -1.89
CUX2O14529 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.23□□□□□ -1.89
CUX2O14529 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.23□□□□□ -1.89
CUX2O14529 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.23□□□□□ -1.89
CUX2O14529 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.23□□□□□ -1.89
CUX2O14529 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.23□□□□□ -1.89
CUX2O14529 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.23□□□□□ -1.89
CUX2O14529 AC104435.1-201ENST00000483483 166 ntBASIC3.23□□□□□ -1.89
CUX2O14529 RNA5SP61-201ENST00000516453 100 ntBASIC3.23□□□□□ -1.89
CUX2O14529 AC091163.3-201ENST00000518269 1144 ntBASIC3.23□□□□□ -1.89
CUX2O14529 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.23□□□□□ -1.89
CUX2O14529 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.23□□□□□ -1.89
CUX2O14529 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CUX2O14529 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.23□□□□□ -1.89
CUX2O14529 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.23□□□□□ -1.89
CUX2O14529 MTND3P13-201ENST00000574391 343 ntBASIC3.23□□□□□ -1.89
CUX2O14529 FAM60BP-201ENST00000578364 658 ntBASIC3.23□□□□□ -1.89
CUX2O14529 MIR4285-201ENST00000581001 85 ntBASIC3.23□□□□□ -1.89
CUX2O14529 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.23□□□□□ -1.89
CUX2O14529 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CUX2O14529 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CUX2O14529 Y_RNA.30-201ENST00000362572 97 ntBASIC3.22□□□□□ -1.89
CUX2O14529 RNA5SP37-201ENST00000365420 130 ntBASIC3.22□□□□□ -1.89
CUX2O14529 SNORD51-201ENST00000384320 80 ntBASIC3.22□□□□□ -1.89
CUX2O14529 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.22□□□□□ -1.89
CUX2O14529 Z75741.2-201ENST00000417272 1167 ntBASIC3.22□□□□□ -1.89
CUX2O14529 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.22□□□□□ -1.89
CUX2O14529 MTND2P19-201ENST00000449129 1012 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms