Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM38O00635 HSPE1P11-201ENST00000339579 310 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 SNORD81.2-201ENST00000365153 76 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 RNU6-738P-201ENST00000384531 106 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AL356432.1-201ENST00000405809 419 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 BX295541.1-201ENST00000417774 250 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM38O00635 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM38O00635 AL353729.1-201ENST00000425044 720 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM38O00635 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM38O00635 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM38O00635 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.89□□□□□ -1.79
TRIM38O00635 SNORD97-201ENST00000459187 142 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM38O00635 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 GMPSP1-201ENST00000514075 579 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 RNU2-10P-201ENST00000516375 211 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AP003072.2-201ENST00000527756 676 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC091516.1-201ENST00000549191 703 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC022968.1-201ENST00000567372 442 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM38O00635 AC106900.2-201ENST00000604994 317 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AL133255.1-201ENST00000606374 441 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC103710.2-201ENST00000609912 942 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 SDR42E1P2-201ENST00000614861 481 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC008121.3-201ENST00000618726 433 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC138305.3-201ENST00000624988 240 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC244205.2-202ENST00000635781 342 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRIM38O00635 AC090740.1-201ENST00000623193 2262 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRIM38O00635 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM38O00635 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM38O00635 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM38O00635 MTND4P27-201ENST00000450813 1354 ntBASIC3.89□□□□□ -1.79
TRIM38O00635 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
TRIM38O00635 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM38O00635 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM38O00635 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM38O00635 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM38O00635 MIR423-201ENST00000362201 94 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 RNU6-845P-201ENST00000362578 103 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 RNA5SP119-201ENST00000362715 117 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC127391.1-201ENST00000411737 98 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 ELOCP4-201ENST00000420090 333 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 PIGFP2-201ENST00000421400 651 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 RPL7L1P10-201ENST00000427790 463 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL356867.1-201ENST00000429623 299 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 GPM6BP2-201ENST00000432046 144 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 GPM6BP1-201ENST00000446387 144 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC079448.1-201ENST00000449377 373 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM38O00635 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 RPL9P32-201ENST00000464118 620 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC023598.1-201ENST00000472521 361 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 RN7SL271P-201ENST00000487601 295 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 SNORA70.16-201ENST00000516390 95 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 SCARNA15.2-201ENST00000516409 127 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM38O00635 FAM60DP-201ENST00000524174 632 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM38O00635 YPEL5P3-201ENST00000547227 352 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.88□□□□□ -1.79
TRIM38O00635 AC093012.1-202ENST00000549403 582 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL355836.1-201ENST00000555951 870 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL121821.2-201ENST00000556081 394 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL359212.1-201ENST00000556608 614 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM38O00635 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM38O00635 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM38O00635 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM38O00635 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.88□□□□□ -1.79
TRIM38O00635 AC012531.5-201ENST00000611375 151 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL133173.2-201ENST00000614270 90 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AC006504.8-201ENST00000621046 635 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL732618.1-201ENST00000623251 301 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 AL136313.1-201ENST00000624804 202 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM38O00635 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM38O00635 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM38O00635 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 PRO1804-201ENST00000623780 2050 ntBASIC3.88□□□□□ -1.79
TRIM38O00635 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TRIM38O00635 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms