Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 ELOCP5-201ENST00000604924 333 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 AL109741.2-201ENST00000455561 343 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.98□□□□□ -2.25
CACNA1AO00555 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.98□□□□□ -2.25
CACNA1AO00555 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
CACNA1AO00555 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CACNA1AO00555 RNA5SP347-201ENST00000362445 119 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 RNA5SP98-201ENST00000363158 137 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 RNU6-997P-201ENST00000384725 107 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 RNA5SP63-201ENST00000391225 112 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 AL360221.1-201ENST00000445989 335 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 AC025918.2-201ENST00000558683 763 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 AC068338.1-201ENST00000565567 176 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 AC240442.1-201ENST00000616055 283 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 AC000123.2-201ENST00000623124 461 ntBASIC0.98□□□□□ -2.25
CACNA1AO00555 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CACNA1AO00555 Y_RNA.146-201ENST00000363549 102 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AC096649.2-201ENST00000416186 393 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.97□□□□□ -2.25
CACNA1AO00555 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC0.97□□□□□ -2.25
CACNA1AO00555 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.97□□□□□ -2.25
CACNA1AO00555 RPL21P39-201ENST00000463605 483 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 RPL21P93-201ENST00000480465 489 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AC233702.1-201ENST00000482905 502 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AC093591.1-201ENST00000491435 481 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.97□□□□□ -2.25
CACNA1AO00555 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.97□□□□□ -2.25
CACNA1AO00555 AC098591.2-201ENST00000510152 315 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.97□□□□□ -2.25
CACNA1AO00555 RNU6-567P-201ENST00000516746 107 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AP004607.1-201ENST00000524456 203 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.97□□□□□ -2.25
CACNA1AO00555 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.97□□□□□ -2.25
CACNA1AO00555 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.97□□□□□ -2.25
CACNA1AO00555 RNU6-923P-201ENST00000364753 107 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CACNA1AO00555 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CACNA1AO00555 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CACNA1AO00555 AP005639.2-201ENST00000527592 928 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 CYP2C61P-201ENST00000604072 290 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AC012443.1-201ENST00000605605 231 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 OR4G3P-201ENST00000633500 913 ntBASIC0.97□□□□□ -2.25
CACNA1AO00555 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.96□□□□□ -2.26
CACNA1AO00555 AC099336.2-201ENST00000422457 254 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.96□□□□□ -2.26
CACNA1AO00555 AL512661.1-201ENST00000434586 1253 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.96□□□□□ -2.26
CACNA1AO00555 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.96□□□□□ -2.26
CACNA1AO00555 MTND5P10-201ENST00000603719 1809 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 Y_RNA.55-201ENST00000362797 102 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 RNU6-1104P-201ENST00000384723 104 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.96□□□□□ -2.26
CACNA1AO00555 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.96□□□□□ -2.26
CACNA1AO00555 RPL30P14-201ENST00000482744 348 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 RPL37P25-201ENST00000507308 276 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 AC091965.2-201ENST00000512324 613 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 OR4V1P-201ENST00000525394 1140 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 MTCO3P24-201ENST00000572729 782 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.96□□□□□ -2.26
CACNA1AO00555 AP000648.3-201ENST00000623539 4507 ntBASIC0.96□□□□□ -2.26
CACNA1AO00555 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
CACNA1AO00555 RNU2-37P-201ENST00000410695 177 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 RNU6-56P-201ENST00000516986 93 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 AC025755.1-201ENST00000521306 278 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CACNA1AO00555 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.95□□□□□ -2.26
CACNA1AO00555 ZNF702P-202ENST00000434269 1966 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 RNA5SP393-201ENST00000363423 117 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 RNU2-40P-201ENST00000410833 196 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.95□□□□□ -2.26
CACNA1AO00555 AC006499.2-201ENST00000513470 337 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 RNU6-287P-201ENST00000516230 98 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 AC068446.3-201ENST00000555285 382 ntBASIC0.95□□□□□ -2.26
CACNA1AO00555 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.95□□□□□ -2.26
CACNA1AO00555 Y_RNA.352-201ENST00000365439 102 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.94□□□□□ -2.26
CACNA1AO00555 AC092451.1-201ENST00000480211 153 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 MTCYBP37-201ENST00000510642 1133 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 AC239860.2-201ENST00000525886 270 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 CENPUP1-201ENST00000526649 1202 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.94□□□□□ -2.26
CACNA1AO00555 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.94□□□□□ -2.26
CACNA1AO00555 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.94□□□□□ -2.26
CACNA1AO00555 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CACNA1AO00555 OR1L1-202ENST00000373686 1083 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 RPS27P1-201ENST00000450552 247 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 RBM43P1-201ENST00000476891 1081 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 ZNF192P1-203ENST00000565888 810 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 AP000654.2-201ENST00000605633 586 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CACNA1AO00555 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.94□□□□□ -2.26
CACNA1AO00555 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.94□□□□□ -2.26
CACNA1AO00555 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
CACNA1AO00555 RNA5SP299-201ENST00000391203 116 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.93□□□□□ -2.26
CACNA1AO00555 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.93□□□□□ -2.26
CACNA1AO00555 AC104308.1-201ENST00000454621 333 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms