Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RPL23AP89-201ENST00000439324 255 ntBASIC4.25□□□□□ -1.73
CBX4O00257 RPS29P7-201ENST00000439662 171 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AC233279.1-201ENST00000455300 423 ntBASIC4.25□□□□□ -1.73
CBX4O00257 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AC010469.1-201ENST00000463864 576 ntBASIC4.25□□□□□ -1.73
CBX4O00257 RPS20P22-201ENST00000473700 357 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.25□□□□□ -1.73
CBX4O00257 RNA5SP143-201ENST00000516936 115 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AC090115.3-201ENST00000553218 849 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.25□□□□□ -1.73
CBX4O00257 MIR3942-201ENST00000585264 109 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AC113139.1-201ENST00000605049 239 ntBASIC4.25□□□□□ -1.73
CBX4O00257 ATP1B3P1-201ENST00000605365 821 ntBASIC4.25□□□□□ -1.73
CBX4O00257 DUSP12P1-201ENST00000612874 516 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AL442067.2-201ENST00000614033 363 ntBASIC4.25□□□□□ -1.73
CBX4O00257 LINC00901.1-201ENST00000617252 152 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AC022418.1-201ENST00000624118 445 ntBASIC4.25□□□□□ -1.73
CBX4O00257 AL133216.2-202ENST00000634512 349 ntBASIC4.25□□□□□ -1.73
CBX4O00257 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CBX4O00257 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CBX4O00257 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CBX4O00257 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CBX4O00257 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CBX4O00257 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CBX4O00257 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.25□□□□□ -1.73
CBX4O00257 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CBX4O00257 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX4O00257 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CBX4O00257 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CBX4O00257 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CBX4O00257 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.24□□□□□ -1.73
CBX4O00257 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.24□□□□□ -1.73
CBX4O00257 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX4O00257 AC068254.2-201ENST00000623938 3577 ntBASIC4.24□□□□□ -1.73
CBX4O00257 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CBX4O00257 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CBX4O00257 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.24□□□□□ -1.73
CBX4O00257 RNU6-1167P-201ENST00000363227 94 ntBASIC4.24□□□□□ -1.73
CBX4O00257 SNORA62.3-201ENST00000365110 153 ntBASIC4.24□□□□□ -1.73
CBX4O00257 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CBX4O00257 RNU6-45P-201ENST00000384471 107 ntBASIC4.24□□□□□ -1.73
CBX4O00257 CYCSP19-201ENST00000411715 316 ntBASIC4.24□□□□□ -1.73
CBX4O00257 RPLP0P7-201ENST00000416050 667 ntBASIC4.24□□□□□ -1.73
CBX4O00257 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.24□□□□□ -1.73
CBX4O00257 AC236972.2-201ENST00000434979 310 ntBASIC4.24□□□□□ -1.73
CBX4O00257 HSPD1P21-201ENST00000436541 245 ntBASIC4.24□□□□□ -1.73
CBX4O00257 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
CBX4O00257 RPL21P41-201ENST00000459863 264 ntBASIC4.24□□□□□ -1.73
CBX4O00257 AC012181.1-201ENST00000479895 423 ntBASIC4.24□□□□□ -1.73
CBX4O00257 AP002812.1-201ENST00000495378 474 ntBASIC4.24□□□□□ -1.73
CBX4O00257 TBCAP3-201ENST00000512475 312 ntBASIC4.24□□□□□ -1.73
CBX4O00257 RPL39P5-202ENST00000512505 151 ntBASIC4.24□□□□□ -1.73
CBX4O00257 RNU6-256P-201ENST00000516747 97 ntBASIC4.24□□□□□ -1.73
CBX4O00257 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX4O00257 AP004242.1-201ENST00000533701 349 ntBASIC4.24□□□□□ -1.73
CBX4O00257 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX4O00257 AC063950.1-201ENST00000552036 308 ntBASIC4.24□□□□□ -1.73
CBX4O00257 MTCO3P23-201ENST00000561363 289 ntBASIC4.24□□□□□ -1.73
CBX4O00257 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.24□□□□□ -1.73
CBX4O00257 AC006270.2-201ENST00000578523 652 ntBASIC4.24□□□□□ -1.73
CBX4O00257 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.24□□□□□ -1.73
CBX4O00257 AC104662.1-201ENST00000604448 511 ntBASIC4.24□□□□□ -1.73
CBX4O00257 AC015813.4-201ENST00000610469 179 ntBASIC4.24□□□□□ -1.73
CBX4O00257 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.24□□□□□ -1.73
CBX4O00257 AL512643.1-201ENST00000635735 524 ntBASIC4.24□□□□□ -1.73
CBX4O00257 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CBX4O00257 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CBX4O00257 AC007390.2-201ENST00000606229 3803 ntBASIC4.24□□□□□ -1.73
CBX4O00257 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CBX4O00257 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
CBX4O00257 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CBX4O00257 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CBX4O00257 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.23□□□□□ -1.73
CBX4O00257 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CBX4O00257 SNORA31-201ENST00000362607 130 ntBASIC4.23□□□□□ -1.73
CBX4O00257 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
CBX4O00257 XGY1-201ENST00000381172 446 ntBASIC4.23□□□□□ -1.73
CBX4O00257 Y_RNA.387-201ENST00000383918 102 ntBASIC4.23□□□□□ -1.73
CBX4O00257 Y_RNA.474-201ENST00000384341 102 ntBASIC4.23□□□□□ -1.73
CBX4O00257 Y_RNA.534-201ENST00000384599 112 ntBASIC4.23□□□□□ -1.73
CBX4O00257 MIR301A-201ENST00000385261 86 ntBASIC4.23□□□□□ -1.73
CBX4O00257 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CBX4O00257 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX4O00257 RPL21P65-201ENST00000406094 466 ntBASIC4.23□□□□□ -1.73
CBX4O00257 RPS4XP7-201ENST00000406274 780 ntBASIC4.23□□□□□ -1.73
CBX4O00257 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX4O00257 AL139396.1-201ENST00000421137 167 ntBASIC4.23□□□□□ -1.73
CBX4O00257 AC091390.3-201ENST00000426478 338 ntBASIC4.23□□□□□ -1.73
CBX4O00257 AL592045.1-201ENST00000429867 352 ntBASIC4.23□□□□□ -1.73
CBX4O00257 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX4O00257 AC006011.1-201ENST00000442758 349 ntBASIC4.23□□□□□ -1.73
CBX4O00257 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX4O00257 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX4O00257 snoU13.22-201ENST00000459428 104 ntBASIC4.23□□□□□ -1.73
CBX4O00257 AP000926.1-201ENST00000479573 241 ntBASIC4.23□□□□□ -1.73
CBX4O00257 AC079140.5-201ENST00000507882 310 ntBASIC4.23□□□□□ -1.73
CBX4O00257 SNORA70.16-201ENST00000516390 95 ntBASIC4.23□□□□□ -1.73
CBX4O00257 Y_RNA.682-201ENST00000516457 100 ntBASIC4.23□□□□□ -1.73
CBX4O00257 RNA5SP471-201ENST00000516971 106 ntBASIC4.23□□□□□ -1.73
CBX4O00257 RNA5SP291-201ENST00000517222 105 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms