Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC091152.3-201ENST00000604227 325 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC025588.2-201ENST00000604851 466 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC091965.4-201ENST00000607691 587 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC005332.10-201ENST00000612725 619 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 uc_338.14-201ENST00000613162 166 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 AC010678.1-201ENST00000614118 713 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 FO624990.1-201ENST00000636373 85 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 Z82209.1-201ENST00000422141 2135 ntBASIC1.99□□□□□ -2.09
SMKR1H3BMG3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMKR1H3BMG3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 RNY4P24-201ENST00000362735 96 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AL139095.1-201ENST00000404326 391 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 RPS4XP7-201ENST00000406274 780 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 RN7SKP202-201ENST00000410439 330 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 RNU4-47P-201ENST00000410876 114 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AL109913.1-201ENST00000421173 514 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 TIMM9P1-201ENST00000436122 256 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 FABP5P14-201ENST00000437273 393 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AL139109.1-201ENST00000455491 297 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 ANKRD26P4-201ENST00000455755 950 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC080013.2-201ENST00000460866 323 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 RPL7P15-201ENST00000461190 712 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC139453.3-201ENST00000493276 369 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 HMGB3P3-201ENST00000510526 400 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC008885.1-201ENST00000514930 301 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 SCGB1D5P-201ENST00000515134 247 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 SNORA74D-201ENST00000516404 141 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 OR5BN1P-201ENST00000532955 829 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 RPS3AP4-201ENST00000555161 764 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC106782.4-201ENST00000568264 210 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 MIR4765-201ENST00000585007 77 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC009974.1-201ENST00000608881 455 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC090970.3-201ENST00000612566 866 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC039056.2-201ENST00000622261 511 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 MIR3651-201ENST00000630427 90 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC012442.3-202ENST00000636742 206 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC103706.2-201ENST00000638080 240 ntBASIC1.98□□□□□ -2.09
SMKR1H3BMG3 AC093010.3-201ENST00000570269 15214 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC004944.1-201ENST00000517807 3059 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 RN7SKP227-201ENST00000364445 330 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 RNU6-701P-201ENST00000384059 107 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 RNU1-138P-201ENST00000384093 164 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 RNU6-14P-201ENST00000384630 106 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 RNU6-19P-201ENST00000384718 107 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 U6atac.2-201ENST00000408644 118 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC078974.1-201ENST00000411597 223 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 USP9YP6-201ENST00000413550 854 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 HMGB1P11-201ENST00000413899 637 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC080125.1-201ENST00000414888 684 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC007560.1-201ENST00000426912 237 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC022018.1-201ENST00000430685 241 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC236972.1-201ENST00000433225 199 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 UBE2FP3-201ENST00000436366 524 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 OR6C5P-201ENST00000452388 923 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 CACYBPP2-201ENST00000453625 678 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC027673.1-201ENST00000456245 405 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms