Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AL049781.1-201ENST00000623195 3585 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC53A6NM62 RNU6-181P-201ENST00000363225 107 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 SMIM11P1-201ENST00000369586 178 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 RNU6-259P-201ENST00000383999 107 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 RNU5A-6P-201ENST00000384136 116 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 Z85995.1-201ENST00000415547 335 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC133104.1-201ENST00000429100 218 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC005019.1-201ENST00000436455 431 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 CBWD4P-201ENST00000445695 655 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 ELOCP23-201ENST00000452014 332 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 C1DP4-201ENST00000455429 424 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 RPL21P10-201ENST00000463521 490 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC012181.1-201ENST00000479895 423 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 RN7SL432P-201ENST00000484057 298 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 RNU6-445P-201ENST00000516949 107 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC022690.1-201ENST00000526681 550 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC068790.2-201ENST00000602601 557 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC007619.2-201ENST00000605743 379 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 MIR6798-201ENST00000612887 67 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC136475.10-201ENST00000620253 385 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AL589994.2-201ENST00000621124 579 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 AC244100.1-202ENST00000621554 382 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 FRG1KP-201ENST00000623592 341 ntBASIC3.38□□□□□ -1.87
LRRC53A6NM62 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LRRC53A6NM62 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC090740.1-201ENST00000623193 2262 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRC53A6NM62 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRC53A6NM62 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRC53A6NM62 Y_RNA.22-201ENST00000362492 102 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 Y_RNA.41-201ENST00000362646 102 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 Y_RNA.126-201ENST00000363382 111 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRC53A6NM62 RNU6-14P-201ENST00000384630 106 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 MIR325-201ENST00000385260 98 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL357075.1-201ENST00000404107 726 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL139397.2-201ENST00000404529 772 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 RPL23AP30-201ENST00000432419 501 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 HMGB3P12-201ENST00000438745 556 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 RPS3AP17-201ENST00000472594 777 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 RPL37P25-201ENST00000507308 276 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC091133.4-201ENST00000511142 308 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 MIR4474-201ENST00000579189 78 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL670379.6-201ENST00000603753 252 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL670379.11-201ENST00000604059 253 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL136363.2-201ENST00000604173 851 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC008162.1-201ENST00000604718 254 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL670379.1-201ENST00000604752 252 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL670379.5-201ENST00000605253 252 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL670379.12-201ENST00000605291 253 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL670379.8-201ENST00000605353 252 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AL670379.7-201ENST00000605823 252 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRC53A6NM62 MTND5P26-201ENST00000426018 1752 ntBASIC3.37□□□□□ -1.87
LRRC53A6NM62 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC53A6NM62 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC53A6NM62 RNU6-960P-201ENST00000364056 120 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 RN7SKP226-201ENST00000364912 300 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 MIR558-201ENST00000384920 94 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 ZNF90P2-204ENST00000419323 1075 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AL590383.1-201ENST00000428602 75 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC007919.1-201ENST00000429380 217 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 MTCO2P11-201ENST00000431069 680 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms