Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-216P-201ENST00000363282 104 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 SNORA16B-201ENST00000364674 135 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-343P-201ENST00000364709 104 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 RNA5SP37-201ENST00000365420 130 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 MIR17-201ENST00000385012 84 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 MTATP6P27-201ENST00000416987 621 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 CCDC58P2-201ENST00000417131 366 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 C1DP1-201ENST00000426049 402 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 UBE2FP3-201ENST00000436366 524 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AL591719.1-201ENST00000444669 744 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC079776.3-201ENST00000450665 370 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC025033.1-201ENST00000463883 194 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 MRPS17P3-201ENST00000465453 385 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC079804.2-201ENST00000490376 200 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 RNU7-193P-201ENST00000516723 65 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 MIR514B-201ENST00000516774 80 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-528P-201ENST00000516926 100 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 IGKV3-31-201ENST00000523109 329 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 MTCO3P15-201ENST00000526563 574 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 MIR5002-201ENST00000584713 97 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC002984.1-201ENST00000591692 448 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AL390208.1-201ENST00000605885 644 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 Y_RNA.783-201ENST00000613546 102 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AP001486.3-201ENST00000615334 372 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AL603758.1-201ENST00000618654 241 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AL162373.1-201ENST00000620433 407 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC093875.1-201ENST00000623688 504 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC068057.2-201ENST00000624047 895 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC120349.2-201ENST00000625002 298 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 RNU5E-8P-201ENST00000363502 116 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-1083P-201ENST00000384022 107 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AL603865.2-201ENST00000401679 213 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 HMGB3P2-201ENST00000411913 584 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 BTF3P8-201ENST00000414577 526 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AL139421.1-201ENST00000423010 169 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 DPRXP1-201ENST00000426312 460 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC027124.2-201ENST00000428249 105 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 PSPHP1-201ENST00000450062 261 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AL021397.1-201ENST00000451806 248 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 RNA5SP233-201ENST00000459153 113 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC022493.1-201ENST00000492984 337 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 RPL38P4-201ENST00000502376 214 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC093801.2-201ENST00000503966 1050 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC026414.1-201ENST00000504046 698 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC092436.1-201ENST00000506450 503 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 HSPA8P13-201ENST00000523715 472 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC010186.2-204ENST00000537668 439 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AL138976.2-201ENST00000563989 694 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC025165.5-201ENST00000602802 578 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AL035411.2-201ENST00000604022 421 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AL445435.1-201ENST00000604232 665 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 APOOP1-201ENST00000604695 592 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AC103710.1-201ENST00000610003 901 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 AL590099.1-201ENST00000615276 138 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 MIR7157-201ENST00000635801 60 ntBASIC1.59□□□□□ -2.15
TRAV41A0A0B4J266 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TRAV41A0A0B4J266 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.59□□□□□ -2.16
TRAV41A0A0B4J266 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TRAV41A0A0B4J266 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RNU6-741P-201ENST00000383889 107 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 RNU6-750P-201ENST00000390946 107 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 SNORA46.1-201ENST00000391069 153 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AL109755.1-201ENST00000401791 649 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 VN1R51P-201ENST00000411675 945 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AL139156.1-201ENST00000412785 841 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 CYCSP48-201ENST00000417124 323 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 OOSP1P1-201ENST00000423265 274 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 EIF4EP4-201ENST00000424916 578 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AL445646.1-201ENST00000431784 216 ntBASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV41A0A0B4J266 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms