Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 Y_RNA.394-201ENST00000383942 103 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 MIR7-3-201ENST00000384898 110 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 MIR454-201ENST00000390180 115 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-1148P-201ENST00000410992 104 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 BTF3L4P3-201ENST00000418879 476 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 AL353691.1-201ENST00000451332 387 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 MTND3P16-201ENST00000452205 344 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 HMGN2P26-201ENST00000463169 339 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 VN1R17P-201ENST00000472048 1090 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 RPS4XP13-201ENST00000483219 789 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 RNU4-49P-201ENST00000516080 140 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 AP003072.1-201ENST00000531740 145 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 MIR3690-201ENST00000580266 75 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 MIR4742-201ENST00000581069 85 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 AL121992.2-201ENST00000606262 256 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 SNORA51-201ENST00000606420 132 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 AC004908.2-201ENST00000609090 574 ntBASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CTDP1Q9Y5B0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTDP1Q9Y5B0 AL138713.1-201ENST00000624026 2130 ntBASIC4.46□□□□□ -1.69
CTDP1Q9Y5B0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTDP1Q9Y5B0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CTDP1Q9Y5B0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AL359893.1-201ENST00000447628 1580 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.22-201ENST00000362492 102 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.231-201ENST00000364358 102 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.326-201ENST00000365176 113 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 MIR558-201ENST00000384920 94 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 RNU2-71P-201ENST00000411395 189 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 OR1AA1P-201ENST00000419597 916 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 YME1L1P1-201ENST00000429435 297 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 NDUFA5P4-201ENST00000436704 385 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 MTND1P18-201ENST00000448191 573 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 SNORD121B-201ENST00000458838 81 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 snoU13.3-201ENST00000459441 104 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC007547.1-201ENST00000462177 490 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 RPL7P47-201ENST00000497299 556 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 UBE2CP3-201ENST00000502715 450 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 RN7SKP116-201ENST00000516902 319 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC087369.1-201ENST00000520775 996 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC128657.1-201ENST00000549459 145 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 SCOCP1-201ENST00000554676 349 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC103710.2-201ENST00000609912 942 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC104237.2-201ENST00000612456 443 ntBASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.46□□□□□ -1.7
CTDP1Q9Y5B0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.184-201ENST00000363884 108 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 SNORD74.4-201ENST00000364129 80 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.384-201ENST00000383909 102 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RPL21P17-201ENST00000397467 475 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RNU4-26P-201ENST00000410270 107 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 Y_RNA.615-201ENST00000410769 117 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-193P-201ENST00000410977 107 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 NDUFB4P5-201ENST00000415445 361 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 MED13P1-201ENST00000428342 171 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AC006946.1-201ENST00000429106 328 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 EZH2P1-201ENST00000431167 291 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 ERLEC1P1-201ENST00000433806 578 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RPL23AP62-201ENST00000463396 453 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AC004062.1-201ENST00000509926 645 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RNU1-95P-201ENST00000516357 160 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RNU1-128P-201ENST00000516704 160 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 RNU6-798P-201ENST00000516912 103 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 SUMO2P20-201ENST00000520803 283 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AP005639.2-201ENST00000527592 928 ntBASIC4.45□□□□□ -1.7
CTDP1Q9Y5B0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms