Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.11□□□□□ -2.23
AP4S1Q9Y587 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.11□□□□□ -2.23
AP4S1Q9Y587 AC091544.4-201ENST00000555268 342 ntBASIC1.11□□□□□ -2.23
AP4S1Q9Y587 AC016925.2-201ENST00000605108 242 ntBASIC1.11□□□□□ -2.23
AP4S1Q9Y587 AP002826.1-201ENST00000608835 315 ntBASIC1.11□□□□□ -2.23
AP4S1Q9Y587 AC093838.1-201ENST00000613014 469 ntBASIC1.11□□□□□ -2.23
AP4S1Q9Y587 AC090116.1-201ENST00000615679 446 ntBASIC1.11□□□□□ -2.23
AP4S1Q9Y587 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AC008568.2-201ENST00000623862 2313 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 ZNF29P-201ENST00000225587 168 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 RNU1-72P-201ENST00000362976 153 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 RNU6-173P-201ENST00000364215 104 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 SNORA26.9-201ENST00000391322 122 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 BTF3L4P2-201ENST00000392798 346 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 OR51A3P-201ENST00000413596 924 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 SFR1P2-201ENST00000421841 730 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AL096803.2-201ENST00000450032 677 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 MIR892C-201ENST00000516410 77 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AC067805.1-201ENST00000559344 470 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 EIF5A2P1-201ENST00000564027 460 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 MIR3660-201ENST00000584845 100 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AC097655.1-201ENST00000635075 318 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 AP000560.1-201ENST00000624150 1937 ntBASIC1.1□□□□□ -2.23
AP4S1Q9Y587 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
AP4S1Q9Y587 ZNF209P-201ENST00000593450 2304 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 SNORD14B-201ENST00000364533 90 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 RNU6-98P-201ENST00000384173 107 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 SNORA70B-201ENST00000384210 135 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 SNORA8-201ENST00000384574 139 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 MIR218-1-201ENST00000384999 110 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 OR6C66P-201ENST00000414917 930 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 RPL27AP8-201ENST00000424277 446 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC092648.1-201ENST00000425870 423 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AL589880.1-201ENST00000448271 287 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 SUMO2P2-201ENST00000456482 255 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 UBE2DNL-203ENST00000474922 222 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC067904.2-201ENST00000517322 1283 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC022254.1-201ENST00000567857 235 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC024619.4-201ENST00000580924 316 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AC103987.3-201ENST00000582071 292 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.09□□□□□ -2.23
AP4S1Q9Y587 OR5H6-203ENST00000642105 978 ntBASIC1.09□□□□□ -2.23
AP4S1Q9Y587 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.24
AP4S1Q9Y587 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
AP4S1Q9Y587 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
AP4S1Q9Y587 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 U3.13-201ENST00000364804 214 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 TXNP7-201ENST00000406296 293 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AL160175.1-201ENST00000428124 247 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 MICF-203ENST00000432679 129 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 DNAJC19P8-201ENST00000452887 259 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 TRBV12-1-201ENST00000479785 344 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 MTCYBP27-201ENST00000555160 670 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 SUB1P3-201ENST00000564581 315 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AL021997.1-201ENST00000605757 193 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 AC002543.1-201ENST00000299783 1954 ntBASIC1.08□□□□□ -2.24
AP4S1Q9Y587 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.08□□□□□ -2.24
AP4S1Q9Y587 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 RNU6-748P-201ENST00000384648 107 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 SNORA67.5-201ENST00000391036 107 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 CYCSP49-201ENST00000420810 319 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 PTENP1-201ENST00000447117 1215 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 SNORD13-201ENST00000459299 104 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 RRN3P3-201ENST00000549207 578 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AL161670.1-201ENST00000554348 137 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms