Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXA2Q9Y261 MIR3199-2-201ENST00000636243 86 ntBASIC2.68□□□□□ -1.98
FOXA2Q9Y261 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
FOXA2Q9Y261 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
FOXA2Q9Y261 MTCO1P12-201ENST00000414273 1543 ntBASIC2.68□□□□□ -1.98
FOXA2Q9Y261 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RNA5SP119-201ENST00000362715 117 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RNU6-778P-201ENST00000363269 103 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RNU5E-6P-201ENST00000365574 115 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 SMIM11P1-201ENST00000369586 178 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RNU6-14P-201ENST00000384630 106 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 SKA2P1-201ENST00000425592 390 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RPS24P13-201ENST00000442520 397 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 COX6CP12-201ENST00000446748 202 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AL139824.2-201ENST00000458731 1095 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RN7SL293P-201ENST00000481765 281 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RPL39P36-201ENST00000490784 156 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC092185.1-201ENST00000491371 97 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RNU7-51P-201ENST00000516560 62 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 SCARNA20.6-201ENST00000517251 106 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC068657.1-201ENST00000520807 306 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AP003181.2-201ENST00000528941 181 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC022878.1-201ENST00000530684 149 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 GLYCAM1-201ENST00000546596 285 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC011611.1-201ENST00000552179 197 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC011471.1-201ENST00000585766 187 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC024220.1-201ENST00000603675 484 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AL137843.1-201ENST00000605078 385 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC138749.5-201ENST00000611461 208 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 uc_338.1-201ENST00000612113 180 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC011939.3-201ENST00000613686 466 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC116165.2-201ENST00000616705 206 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC092140.2-201ENST00000618027 521 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AC007998.5-201ENST00000622938 237 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 U2.21-201ENST00000637295 81 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 OR8B1P-202ENST00000641132 1178 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 ELF2P3-201ENST00000445099 1506 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FOXA2Q9Y261 AL137003.2-201ENST00000606924 2538 ntBASIC2.67□□□□□ -1.98
FOXA2Q9Y261 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 Y_RNA.169-201ENST00000363745 96 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RNU6-658P-201ENST00000384606 106 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 FO393413.1-201ENST00000402892 195 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 Y_RNA.598-201ENST00000410480 95 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RPL32P35-201ENST00000415214 394 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AL353729.1-201ENST00000425044 720 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC093106.2-201ENST00000428212 385 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AL592045.1-201ENST00000429867 352 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC005019.1-201ENST00000436455 431 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC115115.1-201ENST00000449927 248 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RPL21P10-201ENST00000463521 490 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC010486.2-201ENST00000505572 483 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC010587.1-201ENST00000505809 469 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RNA5SP217-201ENST00000515959 91 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RNU1-143P-201ENST00000516296 146 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RNU6-677P-201ENST00000516914 101 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 RNA5SP337-201ENST00000517007 109 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC005476.1-201ENST00000554427 397 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXA2Q9Y261 AC103810.1-201ENST00000579873 453 ntBASIC2.66□□□□□ -1.98
FOXA2Q9Y261 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms