Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC133104.1-201ENST00000429100 218 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC104850.1-201ENST00000435940 476 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 FTH1P1-201ENST00000437933 532 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 RNU7-59P-201ENST00000459101 61 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC108860.1-201ENST00000484521 383 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 RNU6-798P-201ENST00000516912 103 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 ERHP1-201ENST00000523006 310 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 RBM11P1-201ENST00000604951 799 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC008962.1-201ENST00000605729 304 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 uc_338.12-201ENST00000616344 181 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC009812.4-201ENST00000569134 1805 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 OR4G2P-201ENST00000328113 903 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 RNU5E-1-201ENST00000362477 120 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 RNY4P16-201ENST00000364768 94 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 RPS15AP12-201ENST00000419498 388 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 DPPA2P1-201ENST00000428060 556 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 RPL31P35-201ENST00000431058 377 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 TPT1P14-201ENST00000448018 505 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 AC079448.1-201ENST00000449377 373 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 C1DP4-201ENST00000455429 424 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 RNA5SP341-201ENST00000516261 117 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 TPRKBP2-201ENST00000565969 475 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 OR4K8P-201ENST00000578842 1048 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 MIR4513-201ENST00000581077 86 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 MIR4298-201ENST00000584380 73 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 AL034351.1-201ENST00000605288 668 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 AL391813.2-201ENST00000609113 322 ntBASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CDK11AQ9UQ88 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDK11AQ9UQ88 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
CDK11AQ9UQ88 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDK11AQ9UQ88 AC068647.1-201ENST00000489539 2265 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 RNA5SP197-201ENST00000363357 119 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 SNORA20.2-201ENST00000383922 131 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 RNU6-637P-201ENST00000384050 107 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 U3.42-201ENST00000408746 214 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 ELOCP4-201ENST00000420090 333 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC073464.1-201ENST00000429823 534 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC236972.1-201ENST00000433225 199 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC024082.2-201ENST00000434771 238 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 HIGD1AP11-201ENST00000438361 280 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC007182.2-201ENST00000489251 402 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC006445.1-201ENST00000491925 405 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 FAM60DP-201ENST00000524174 632 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AP000857.1-201ENST00000532151 543 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC124947.2-202ENST00000552735 133 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC055876.1-202ENST00000567053 138 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 LARP7P3-201ENST00000579888 337 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC008277.2-201ENST00000605196 797 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 MIR6863-201ENST00000636112 90 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 AC005832.2-201ENST00000538921 1430 ntBASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK11AQ9UQ88 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 RNU6-432P-201ENST00000384196 109 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 Y_RNA.510-201ENST00000384511 114 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 OR4K11P-201ENST00000431829 904 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 HIGD1AP1-201ENST00000550979 275 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AC005476.1-201ENST00000554427 397 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 OR4T1P-201ENST00000554933 911 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AC009570.1-201ENST00000609599 745 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AC245517.5-201ENST00000611529 162 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 U7.8-201ENST00000619968 63 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 AL356321.1-201ENST00000621360 228 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms