Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU1-108P-201ENST00000362556 161 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 Y_RNA.80-201ENST00000362996 102 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-1097P-201ENST00000363586 107 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-26P-201ENST00000383985 107 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-532P-201ENST00000384318 107 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-244P-201ENST00000391028 104 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MIR1305-201ENST00000408300 86 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC080125.1-201ENST00000414888 684 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL049734.2-201ENST00000441066 616 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 PCNPP5-201ENST00000452246 481 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RN7SL585P-201ENST00000470538 280 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 VN1R17P-201ENST00000472048 1090 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 TRBV1-201ENST00000476502 284 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL163973.1-201ENST00000484753 577 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RPL22P13-201ENST00000493291 347 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-1088P-201ENST00000516850 104 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MIR3672-201ENST00000584290 82 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC016727.2-201ENST00000603988 621 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC022893.3-201ENST00000607665 437 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 BX664608.1-201ENST00000610519 487 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC026634.1-201ENST00000634369 198 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 DDX18P4-201ENST00000511690 1966 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU1-33P-201ENST00000364249 162 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNA5SP146-201ENST00000410743 123 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNA5SP498-201ENST00000411342 120 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC073264.1-201ENST00000411508 416 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC092634.6-201ENST00000418558 192 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 EIF4EP1-201ENST00000422311 642 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 DPY19L1P2-201ENST00000426647 915 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RPL7L1P10-201ENST00000427790 463 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC093716.1-201ENST00000435923 377 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AL590664.1-201ENST00000448065 339 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC073415.1-201ENST00000449240 153 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 SNORD105B-201ENST00000458770 79 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RN7SL601P-201ENST00000471221 293 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC084198.1-201ENST00000477747 402 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 TTC39CP1-201ENST00000512513 755 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNU4-29P-201ENST00000515943 174 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNU6-583P-201ENST00000516012 92 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RRN3P3-201ENST00000549207 578 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 MTCO3P23-201ENST00000561363 289 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 BBIP1P1-201ENST00000602999 279 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC130324.3-201ENST00000614165 542 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC006386.2-201ENST00000624491 75 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC012005.1-201ENST00000624575 75 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 Y_RNA.153-201ENST00000363615 91 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNU6-1032P-201ENST00000384100 107 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 Y_RNA.493-201ENST00000384422 102 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 Y_RNA.496-201ENST00000384444 101 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNU6-316P-201ENST00000391027 107 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 MIR1303-201ENST00000408625 86 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNU2-28P-201ENST00000410457 189 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 RNU6-370P-201ENST00000411008 104 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AL136133.1-201ENST00000413694 376 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 PGBD4P6-201ENST00000421501 610 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AL591419.1-201ENST00000427423 339 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 ERLEC1P1-201ENST00000433806 578 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC092809.1-201ENST00000441469 474 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 ELOCP24-201ENST00000456370 334 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 Y_RNA.638-201ENST00000459374 113 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 SNORA48.10-201ENST00000516965 160 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC087369.1-201ENST00000520775 996 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC022616.4-201ENST00000522985 181 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC023157.2-201ENST00000540596 141 ntBASIC2.81□□□□□ -1.96
NOTCH3Q9UM47 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms