Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AC108022.1-201ENST00000493466 478 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AC006499.6-201ENST00000511169 607 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AC015795.1-201ENST00000513669 327 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 Y_RNA.720-201ENST00000517166 92 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 RN7SKP295-201ENST00000517264 153 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 CYCSP27-201ENST00000527643 293 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AL121655.1-201ENST00000605811 308 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 MIR6780A-201ENST00000615089 68 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AL353748.2-201ENST00000622148 471 ntBASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRPF3Q9ULD4 AL049641.1-201ENST00000441055 1948 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 ZNF137P-201ENST00000456718 1920 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 RNU6-1040P-201ENST00000383974 107 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 MIR298-201ENST00000401212 88 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AL356057.3-201ENST00000402607 340 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC080125.1-201ENST00000414888 684 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 RPL7P37-201ENST00000425095 738 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 RPL23AP65-201ENST00000475608 468 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC097473.1-201ENST00000508142 408 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 IGKV1-32-201ENST00000519290 311 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC100830.2-201ENST00000581636 240 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC007938.3-201ENST00000604965 623 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 AC006023.2-201ENST00000609916 167 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 PISRT1.1-201ENST00000616930 107 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 MIR6730-201ENST00000622213 67 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 MAPK10-320ENST00000641462 6696 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 MTND4P1-201ENST00000457501 1466 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 PRO1804-201ENST00000623780 2050 ntBASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.36□□□□□ -1.55
BRPF3Q9ULD4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC079741.1-201ENST00000321498 212 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 Y_RNA.5-201ENST00000362334 102 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 SNORD3E-201ENST00000362899 217 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 Y_RNA.148-201ENST00000363557 117 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC117470.1-201ENST00000381974 330 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 SNORA75B-201ENST00000384053 137 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 RNU6-1105P-201ENST00000384774 107 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 RNU6-328P-201ENST00000390887 106 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 RNA5SP397-201ENST00000391323 118 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AL590704.1-201ENST00000402856 794 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC119751.6-201ENST00000416712 186 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 RPL21P91-201ENST00000429231 479 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AL035666.1-201ENST00000446195 348 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 RN7SL354P-201ENST00000469282 294 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC008897.1-201ENST00000494006 347 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 GMPSP1-201ENST00000514075 579 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 RNU1-54P-201ENST00000517181 120 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AP006289.1-201ENST00000538089 277 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC107016.1-201ENST00000550463 337 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AL355836.1-201ENST00000555951 870 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 ZNF192P1-203ENST00000565888 810 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC005951.2-201ENST00000576282 495 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC020914.4-201ENST00000597690 277 ntBASIC5.35□□□□□ -1.55
BRPF3Q9ULD4 AC106900.2-201ENST00000604994 317 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms