Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MTND4P27-201ENST00000450813 1354 ntBASIC0.88□□□□□ -2.27
CHD7Q9P2D1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CHD7Q9P2D1 Y_RNA.167-201ENST00000363735 109 ntBASIC0.88□□□□□ -2.27
CHD7Q9P2D1 MIR150-201ENST00000385048 84 ntBASIC0.88□□□□□ -2.27
CHD7Q9P2D1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.88□□□□□ -2.27
CHD7Q9P2D1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.88□□□□□ -2.27
CHD7Q9P2D1 AC239798.3-201ENST00000454459 408 ntBASIC0.88□□□□□ -2.27
CHD7Q9P2D1 MTND3P24-201ENST00000506306 329 ntBASIC0.88□□□□□ -2.27
CHD7Q9P2D1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.88□□□□□ -2.27
CHD7Q9P2D1 AC121761.2-201ENST00000617300 689 ntBASIC0.88□□□□□ -2.27
CHD7Q9P2D1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CHD7Q9P2D1 ZNF965P-201ENST00000432501 817 ntBASIC0.87□□□□□ -2.27
CHD7Q9P2D1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD7Q9P2D1 AC080100.1-201ENST00000624239 5356 ntBASIC0.87□□□□□ -2.27
CHD7Q9P2D1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD7Q9P2D1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.87□□□□□ -2.27
CHD7Q9P2D1 AC135999.1-201ENST00000478962 479 ntBASIC0.87□□□□□ -2.27
CHD7Q9P2D1 AL138976.2-201ENST00000563989 694 ntBASIC0.87□□□□□ -2.27
CHD7Q9P2D1 HMGB1P24-202ENST00000615653 685 ntBASIC0.87□□□□□ -2.27
CHD7Q9P2D1 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
CHD7Q9P2D1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.87□□□□□ -2.27
CHD7Q9P2D1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.87□□□□□ -2.27
CHD7Q9P2D1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.87□□□□□ -2.27
CHD7Q9P2D1 AC009090.3-201ENST00000616553 565 ntBASIC0.87□□□□□ -2.27
CHD7Q9P2D1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.87□□□□□ -2.27
CHD7Q9P2D1 Y_RNA.412-201ENST00000384001 104 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 RNU6-1235P-201ENST00000384559 107 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 MRPS36P1-201ENST00000421291 307 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 RPL27AP8-201ENST00000424277 446 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AL136380.1-201ENST00000447970 162 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.86□□□□□ -2.27
CHD7Q9P2D1 RNU6-498P-201ENST00000459468 107 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 RPL31P58-201ENST00000469001 379 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 RPS23P3-201ENST00000470993 430 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 MRPS17P9-201ENST00000511924 393 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AC079148.1-201ENST00000565944 819 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 MIR4458-201ENST00000578872 75 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AC123786.2-201ENST00000603459 275 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AC106052.1-201ENST00000608029 497 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
CHD7Q9P2D1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AL139397.2-201ENST00000404529 772 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.86□□□□□ -2.27
CHD7Q9P2D1 PRELID3BP11-201ENST00000414230 479 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AL627224.1-201ENST00000448334 444 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AC005908.1-201ENST00000468701 347 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.86□□□□□ -2.27
CHD7Q9P2D1 AC007275.1-201ENST00000621243 671 ntBASIC0.86□□□□□ -2.27
CHD7Q9P2D1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.86□□□□□ -2.27
CHD7Q9P2D1 RNU6-16P-201ENST00000384385 107 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 RNU6-955P-201ENST00000410497 104 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 MTCO3P46-201ENST00000425787 232 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AC012497.1-201ENST00000429392 575 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 RNA5SP499-201ENST00000363982 119 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 SNORD23.1-201ENST00000408212 104 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 RPS6P14-201ENST00000425165 719 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AC096751.1-202ENST00000502691 1067 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AP003117.1-201ENST00000602771 554 ntBASIC0.85□□□□□ -2.27
CHD7Q9P2D1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CHD7Q9P2D1 AC004022.2-201ENST00000413824 193 ntBASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.84□□□□□ -2.27
CHD7Q9P2D1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AK3P2-201ENST00000507976 429 ntBASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AC067942.3-201ENST00000512025 362 ntBASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AL161734.1-201ENST00000609720 557 ntBASIC0.84□□□□□ -2.27
CHD7Q9P2D1 SNORA46.1-201ENST00000391069 153 ntBASIC0.84□□□□□ -2.27
CHD7Q9P2D1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AC004808.1-201ENST00000627671 721 ntBASIC0.84□□□□□ -2.27
CHD7Q9P2D1 AC098583.1-201ENST00000480875 255 ntBASIC0.84□□□□□ -2.28
CHD7Q9P2D1 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.28
CHD7Q9P2D1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.84□□□□□ -2.28
CHD7Q9P2D1 AC138473.1-201ENST00000605717 526 ntBASIC0.84□□□□□ -2.28
CHD7Q9P2D1 AC010889.1-201ENST00000566193 2666 ntBASIC0.84□□□□□ -2.28
CHD7Q9P2D1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC233728.2-201ENST00000425348 757 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AL357134.1-201ENST00000445848 426 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 RPS29P28-201ENST00000446439 141 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC105252.1-201ENST00000503089 286 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AP001960.1-201ENST00000506494 658 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.83□□□□□ -2.28
CHD7Q9P2D1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.83□□□□□ -2.28
CHD7Q9P2D1 CST2P1-201ENST00000425770 87 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC000111.3-201ENST00000433478 193 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms