Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC012181.1-201ENST00000479895 423 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC106707.2-201ENST00000484182 374 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC116562.3-201ENST00000506136 177 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC006445.2-201ENST00000510061 472 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RNU6-720P-201ENST00000516363 108 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RNA5SP471-201ENST00000516971 106 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC068587.5-201ENST00000528506 175 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 OR4R1P-201ENST00000529879 463 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AL121576.1-201ENST00000556055 276 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 TRAV28-201ENST00000557548 323 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC010546.1-201ENST00000569391 485 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 MIR3944-201ENST00000581277 108 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 MIR3922-201ENST00000585192 84 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC068790.6-201ENST00000602558 258 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AL022154.1-201ENST00000604698 785 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AL158032.1-201ENST00000605401 106 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 SNORA51-201ENST00000606420 132 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC087241.4-201ENST00000612441 480 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC034102.8-201ENST00000615146 484 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC009161.2-201ENST00000624626 138 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AL049641.1-201ENST00000441055 1948 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 CEP170P1-201ENST00000502249 4587 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 Y_RNA.1-201ENST00000352915 104 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 RNU6-512P-201ENST00000364438 103 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 RNU2-9P-201ENST00000410194 145 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 RNU2-33P-201ENST00000410344 192 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 MTCO1P21-201ENST00000416634 589 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 NEK4P1-201ENST00000433383 879 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC073063.1-201ENST00000434352 607 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 MTATP6P16-201ENST00000434543 526 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 Z82210.1-201ENST00000440037 231 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AL590664.1-201ENST00000448065 339 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 RPS3AP14-201ENST00000483907 780 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 RPL9P6-201ENST00000492764 598 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 RPL7P47-201ENST00000497299 556 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 HMGB1P29-201ENST00000505659 499 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC026784.1-201ENST00000507986 352 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 SNORA31.3-201ENST00000516029 96 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 RNU6-677P-201ENST00000516914 101 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 OR5B19P-201ENST00000531766 928 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC098826.3-201ENST00000603823 466 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC008536.2-201ENST00000607284 349 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AL365204.3-201ENST00000612448 685 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 U4.6-201ENST00000621618 127 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 MIR6863-201ENST00000636112 90 ntBASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
HCN3Q9P1Z3 AL136164.4-201ENST00000625013 2135 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 AL137003.2-201ENST00000606924 2538 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 RPL7P26-201ENST00000333817 754 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 RNU6-179P-201ENST00000363350 107 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 RNU6-525P-201ENST00000363685 104 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 Y_RNA.367-201ENST00000365544 101 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 RNU6-190P-201ENST00000384154 102 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 SNORA24.1-201ENST00000384401 135 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 MIR218-2-201ENST00000385006 110 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 AL139397.2-201ENST00000404529 772 ntBASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN3Q9P1Z3 AC007390.1-201ENST00000415722 356 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms