Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR3199-1-201ENST00000582434 88 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC025588.2-201ENST00000604851 466 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AL139344.1-201ENST00000605228 195 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC025594.3-201ENST00000613068 790 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC010133.1-201ENST00000615809 842 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AL445264.1-201ENST00000621719 171 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AL356094.1-201ENST00000624663 1212 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.05□□□□□ -2.08
VAPAQ9P0L0 AC010329.5-201ENST00000623497 2174 ntBASIC2.05□□□□□ -2.08
VAPAQ9P0L0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 SNORA3A-201ENST00000364113 130 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 Y_RNA.408-201ENST00000383987 102 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 RNU6-1207P-201ENST00000384343 107 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 Y_RNA.578-201ENST00000390903 88 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 U3.40-201ENST00000408706 208 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 SNORA11-201ENST00000408789 128 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AC068533.2-201ENST00000411872 306 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AL451054.2-201ENST00000420896 202 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AL109913.1-201ENST00000421173 514 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 HMGN2P38-201ENST00000423806 265 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 RPL18AP17-201ENST00000455326 198 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 RPL31P50-201ENST00000471002 296 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AC004924.1-201ENST00000480160 781 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AC109486.1-201ENST00000486833 374 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 SLC25A15P5-201ENST00000508033 253 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 OR6C7P-201ENST00000547875 934 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AP003485.2-201ENST00000623636 610 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AC019226.1-201ENST00000625666 515 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.04□□□□□ -2.08
VAPAQ9P0L0 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.04□□□□□ -2.08
VAPAQ9P0L0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC010889.1-201ENST00000566193 2666 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 RNU6-359P-201ENST00000365466 108 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 RNU6-516P-201ENST00000411381 104 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC007560.1-201ENST00000426912 237 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 MTATP6P7-201ENST00000453315 681 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC097493.1-201ENST00000463958 372 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC126389.1-201ENST00000477436 290 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC006499.2-201ENST00000513470 337 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL359212.1-201ENST00000556608 614 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC104072.1-201ENST00000568817 668 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 MIR5571-201ENST00000577998 113 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL138478.1-201ENST00000612252 832 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL449363.1-201ENST00000617815 186 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL031601.2-202ENST00000622650 282 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AC231657.1-201ENST00000624313 397 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 AL109809.4-201ENST00000603520 2185 ntBASIC2.03□□□□□ -2.08
VAPAQ9P0L0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 RNA5SP289-201ENST00000362332 137 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 SNORA5B-201ENST00000363786 132 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 RNU6-114P-201ENST00000384704 105 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 RPS4XP8-201ENST00000402039 771 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 TXNP7-201ENST00000406296 293 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 USP9YP19-201ENST00000412165 485 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC096649.2-201ENST00000416186 393 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 CYCSP48-201ENST00000417124 323 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 USP9YP13-201ENST00000417797 480 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms