Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 SNAP23P1-201ENST00000433229 246 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AF228730.2-201ENST00000438784 848 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 RPL26P6-201ENST00000440913 438 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 HMGN2P7-201ENST00000456186 273 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 HSPE1P6-201ENST00000479457 291 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AC006517.1-201ENST00000480485 328 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AP001086.1-201ENST00000494882 321 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 RNU6-256P-201ENST00000516747 97 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 RNU6-566P-201ENST00000516790 107 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 HPRT1P3-201ENST00000539521 576 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 MIR3921-201ENST00000577308 85 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 AL158032.1-201ENST00000605401 106 ntBASIC3.78□□□□□ -1.8
VSX1Q9NZR4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
VSX1Q9NZR4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC116096.1-201ENST00000566804 2314 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 RNA5SP235-201ENST00000365411 114 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 RNU6-14P-201ENST00000384630 106 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 MIR513A2-201ENST00000385249 127 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 MTCYBP4-201ENST00000401524 249 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AL590704.1-201ENST00000402856 794 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 MTCYBP6-201ENST00000441810 138 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 PRDX3P3-201ENST00000447765 522 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 HMGB3P30-201ENST00000457863 606 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 Vault.1-201ENST00000516474 102 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC063950.1-201ENST00000552036 308 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC090115.3-201ENST00000553218 849 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 MIR5692A1-201ENST00000580523 69 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC023043.2-201ENST00000589678 1026 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 FAM27D1-201ENST00000612308 341 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC034102.8-201ENST00000615146 484 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC103858.2-201ENST00000621471 543 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AP000346.3-201ENST00000622821 210 ntBASIC3.77□□□□□ -1.81
VSX1Q9NZR4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX1Q9NZR4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RNU5A-1-201ENST00000362698 116 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.480-201ENST00000384364 102 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 U3.22-201ENST00000391120 215 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RN7SKP158-201ENST00000410453 326 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 BX682237.1-201ENST00000415016 335 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RPLP0P7-201ENST00000416050 667 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RPL27AP8-201ENST00000424277 446 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 FAR2P4-202ENST00000425399 584 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AL591212.2-201ENST00000433923 257 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AL359073.1-201ENST00000448036 403 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RPL9P32-201ENST00000464118 620 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RPL21P93-201ENST00000480465 489 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RN7SL691P-201ENST00000494487 301 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RNU6-559P-201ENST00000516151 98 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RNU6-1153P-201ENST00000516760 105 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 RNA5SP454-201ENST00000517231 127 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 443.4 ms