Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AL391261.3-201ENST00000557194 520 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC135628.1-201ENST00000568867 534 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 MIR3915-201ENST00000578518 97 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC022146.1-201ENST00000595307 847 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 DPPA3P3-201ENST00000603842 430 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC007179.3-201ENST00000604976 235 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC006338.1-201ENST00000618453 749 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC099506.2-201ENST00000623074 221 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC091953.2-201ENST00000623979 160 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC007494.3-201ENST00000624660 743 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 MTND5P1-201ENST00000445440 1375 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 RNA5SP374-201ENST00000362939 125 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AL021407.1-201ENST00000404531 386 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 RPS15AP12-201ENST00000419498 388 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 HMGN2P30-201ENST00000423237 256 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 MTND1P28-201ENST00000435623 950 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 RAC1P5-201ENST00000512182 576 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 FABP5P5-201ENST00000515537 406 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AP003467.2-201ENST00000520175 319 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AC245166.1-201ENST00000521012 253 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AL157394.1-201ENST00000562983 1224 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 ROCK1P1-201ENST00000573767 549 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 MIR3118-1-201ENST00000581787 76 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AC005498.1-201ENST00000592125 465 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AF131215.7-201ENST00000602443 707 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AC098826.3-201ENST00000603823 466 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AL161798.1-201ENST00000604630 131 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AL391813.2-201ENST00000609113 322 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AC008498.1-201ENST00000613012 531 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AC025594.3-201ENST00000613068 790 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 AC091931.1-201ENST00000623488 728 ntBASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.42□□□□□ -1.86
BLOC1S4Q9NUP1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 RNU6-511P-201ENST00000363496 107 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 MIR1289-1-201ENST00000408836 144 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AL356583.2-201ENST00000426536 280 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AL451062.2-201ENST00000427515 271 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 HMGB1P9-201ENST00000429856 646 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 GPM6BP2-201ENST00000432046 144 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 NEFMP1-201ENST00000443423 1006 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 GPM6BP1-201ENST00000446387 144 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 COX6CP12-201ENST00000446748 202 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 RPS27P29-201ENST00000463110 252 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 RPL7P5-201ENST00000471472 736 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 RPS3AP43-201ENST00000479743 781 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AC026801.1-201ENST00000497178 464 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AC008885.1-201ENST00000514930 301 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AP006587.4-201ENST00000526053 529 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 NACAP3-201ENST00000552100 481 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 AC007998.5-201ENST00000622938 237 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 MIR3651-201ENST00000630427 90 ntBASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
BLOC1S4Q9NUP1 UBE2L2-201ENST00000254302 429 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-701P-201ENST00000384059 107 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RPL21P3-201ENST00000395517 478 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RN7SKP220-201ENST00000410611 288 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RNU2-68P-201ENST00000410878 191 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-193P-201ENST00000410977 107 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 NDUFS5P4-201ENST00000412983 318 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AL445567.1-201ENST00000439121 144 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RPL12P25-201ENST00000455592 494 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC146507.2-201ENST00000460608 476 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC091179.1-201ENST00000461606 579 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC022634.1-201ENST00000520765 532 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms