Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TLR9Q9NR96 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TLR9Q9NR96 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TLR9Q9NR96 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TLR9Q9NR96 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TLR9Q9NR96 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 SNORA62.1-201ENST00000364287 154 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 RNU5E-6P-201ENST00000365574 115 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 Y_RNA.373-201ENST00000365600 103 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 SNORA22B-201ENST00000383876 138 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 MIR93-201ENST00000385024 80 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 HMGN2P31-201ENST00000432430 273 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TLR9Q9NR96 RPL36AP6-201ENST00000435770 321 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 HMGB3P11-201ENST00000440127 604 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 RPL23AP33-201ENST00000442301 452 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 PRPS1P1-201ENST00000445305 876 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 PPIAP3-201ENST00000450588 505 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 RPS11P1-201ENST00000451072 473 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 AC108145.1-201ENST00000503770 153 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 PPBPP1-201ENST00000510807 373 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 OR5B10P-201ENST00000532869 642 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 AC091516.1-201ENST00000549191 703 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 MIR4513-201ENST00000581077 86 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TLR9Q9NR96 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 AL139395.1-201ENST00000603662 160 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 DPPA3P3-201ENST00000603842 430 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 AL022099.1-201ENST00000604551 712 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.3□□□□□ -1.72
TLR9Q9NR96 AL049555.1-201ENST00000562834 1933 ntBASIC4.3□□□□□ -1.72
TLR9Q9NR96 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 Y_RNA.31-201ENST00000362574 102 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 Y_RNA.167-201ENST00000363735 109 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 RNU6-1279P-201ENST00000383917 103 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 Y_RNA.414-201ENST00000384011 101 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 Y_RNA.530-201ENST00000384587 101 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 MIR153-1-201ENST00000384914 90 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 LAP3P1-201ENST00000403648 294 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AL592114.1-201ENST00000403842 483 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AL606923.1-201ENST00000406616 190 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 RNU4-65P-201ENST00000410473 140 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC113618.1-201ENST00000416747 285 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 CYCSP43-201ENST00000438233 310 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AL118520.1-201ENST00000450770 291 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC133473.1-201ENST00000455173 299 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 SNORD97-201ENST00000459187 142 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 RNU7-180P-201ENST00000459240 63 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 RPL23AP11-201ENST00000475260 469 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 RPL7P23-201ENST00000493874 747 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 RNU1-95P-201ENST00000516357 160 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 RNU1-128P-201ENST00000516704 160 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC103783.1-201ENST00000520506 373 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 HMGN1P28-201ENST00000521340 364 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC100870.1-201ENST00000522035 505 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 COPS8P3-201ENST00000526024 482 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC063950.1-201ENST00000552036 308 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 MIR3942-201ENST00000585264 109 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 AC019193.3-201ENST00000609144 554 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 7SK.10-201ENST00000621414 298 ntBASIC4.29□□□□□ -1.72
TLR9Q9NR96 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
TLR9Q9NR96 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TLR9Q9NR96 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TLR9Q9NR96 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms