Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 MIR5007-201ENST00000583098 95 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AC010678.1-201ENST00000614118 713 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AC073592.7-201ENST00000623659 507 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AC231657.1-201ENST00000624313 397 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AL356094.1-201ENST00000624663 1212 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 MIR7157-201ENST00000635801 60 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AL079343.1-201ENST00000572358 1771 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VCX3AQ9NNX9 RNA5SP374-201ENST00000362939 125 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 SNORA67.4-201ENST00000384688 142 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 AL590084.2-201ENST00000401481 382 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 NDUFS5P4-201ENST00000412983 318 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 HMGB1P11-201ENST00000413899 637 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 BTF3L4P3-201ENST00000418879 476 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 USP9YP21-201ENST00000420603 432 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC013262.1-201ENST00000426710 252 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 ZYG11AP1-201ENST00000430329 837 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AL136380.1-201ENST00000447970 162 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC021269.2-201ENST00000532318 330 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 CBX3P7-201ENST00000532876 502 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC126365.2-201ENST00000580630 379 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC090897.2-201ENST00000581715 130 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC009237.15-201ENST00000610252 501 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 MIR378J-201ENST00000611988 109 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC009831.4-201ENST00000620744 325 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 AC099063.3-201ENST00000642066 185 ntBASIC2□□□□□ -2.09
VCX3AQ9NNX9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
VCX3AQ9NNX9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RNA5SP515-201ENST00000364570 118 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RNU1-73P-201ENST00000383971 164 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 MIR17-201ENST00000385012 84 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 PTMAP2-201ENST00000397627 327 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AL356421.1-201ENST00000403255 413 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 UBE2FP1-201ENST00000416536 447 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 EIF4EP4-201ENST00000424916 578 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 ELOCP14-201ENST00000428070 331 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 ELOCP7-201ENST00000439968 331 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AL135938.1-201ENST00000443141 297 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 PSPHP1-201ENST00000450062 261 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC009220.1-201ENST00000451614 275 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 MTND1P9-201ENST00000453775 944 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC118465.1-201ENST00000513820 1271 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RNU6-150P-201ENST00000516237 95 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RNA5SP320-201ENST00000516263 124 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 RNU6-1028P-201ENST00000517164 93 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC087894.1-201ENST00000538359 518 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC022080.3-201ENST00000544433 482 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC008507.2-201ENST00000588402 1176 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AF038458.1-201ENST00000588406 262 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 MTATP6P2-201ENST00000603319 678 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC006023.1-201ENST00000603944 259 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC007619.2-201ENST00000605743 379 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AL161423.1-201ENST00000613700 262 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 AC007998.5-201ENST00000622938 237 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 PISRT1-201ENST00000626175 531 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 MIR3199-2-201ENST00000636243 86 ntBASIC1.99□□□□□ -2.09
VCX3AQ9NNX9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms