Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 RPL7P20-201ENST00000520308 745 ntBASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 AP002770.2-201ENST00000543613 532 ntBASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 AC027176.1-201ENST00000560204 514 ntBASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
TM9SF3Q9HD45 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AL161781.1-201ENST00000354277 403 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 SNORA70B-201ENST00000384210 135 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 Y_RNA.548-201ENST00000384656 105 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 MIR888-201ENST00000401186 77 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AL109755.1-201ENST00000401791 649 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AL136310.1-201ENST00000404926 654 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 RPS4XP7-201ENST00000406274 780 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AL121890.1-201ENST00000435457 205 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 RPS15AP5-201ENST00000436276 388 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 XKRY-201ENST00000510392 1100 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 TBCAP3-201ENST00000512475 312 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 RNU1-41P-201ENST00000516161 162 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 RNA5SP282-201ENST00000516355 108 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 RNU1-48P-201ENST00000516400 162 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 RNU6-714P-201ENST00000516963 103 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AC005832.3-201ENST00000537929 631 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 SNORD53-201ENST00000579969 78 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 MIR4658-201ENST00000584344 65 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 BBIP1P1-201ENST00000602999 279 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AC131235.4-201ENST00000609288 620 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 FTX_3.1-201ENST00000610451 147 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AC107075.1-201ENST00000613695 314 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AC009268.2-201ENST00000621925 457 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 OR1S1-201ENST00000624470 978 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 AC010329.5-201ENST00000623497 2174 ntBASIC2.61□□□□□ -1.99
TM9SF3Q9HD45 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 SNORD62.1-201ENST00000362541 86 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 SNORA23-201ENST00000365128 182 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 RNU6-413P-201ENST00000384115 107 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC023141.4-201ENST00000412031 328 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC009963.1-201ENST00000417265 157 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC092648.1-201ENST00000425870 423 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 OSTCP8-201ENST00000445117 448 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AL513124.1-201ENST00000450410 614 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC133134.1-201ENST00000466800 359 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC134050.1-201ENST00000495088 933 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC025881.1-201ENST00000518851 512 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 MTND4LP5-201ENST00000605152 292 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC024933.1-201ENST00000608472 348 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC009974.1-201ENST00000608881 455 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC064859.1-201ENST00000624741 174 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 MTND1P37-201ENST00000636562 264 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AC009902.3-201ENST00000606235 2172 ntBASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.6□□□□□ -1.99
TM9SF3Q9HD45 Z82209.1-201ENST00000422141 2135 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 RNU6-343P-201ENST00000364709 104 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 ANAPC10P1-201ENST00000395991 556 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 ERHP2-201ENST00000402323 299 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 RPLP0P7-201ENST00000416050 667 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AL513175.2-201ENST00000422071 443 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 NANOGP5-201ENST00000424456 877 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AL031313.1-201ENST00000448435 256 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 RPL18AP17-201ENST00000455326 198 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AL139109.1-201ENST00000455491 297 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 ATG12P2-201ENST00000456830 416 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AC107626.1-201ENST00000471084 183 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 MTATP6P9-201ENST00000515039 680 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 RNU5F-8P-201ENST00000515941 111 ntBASIC2.59□□□□□ -1.99
TM9SF3Q9HD45 SCARNA17.1-201ENST00000516211 143 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms