Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC234771.5-201ENST00000600161 514 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC012119.1-201ENST00000603184 222 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC002044.1-201ENST00000606707 158 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 SNORD58B-201ENST00000607313 66 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AP001005.3-201ENST00000622049 129 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RNU1-115P-201ENST00000365329 160 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RHOT1P2-201ENST00000366423 333 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RNU6-842P-201ENST00000384269 107 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 Y_RNA.556-201ENST00000384677 113 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 MIR135A2-201ENST00000384854 100 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RNU2-23P-201ENST00000410545 195 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC096664.2-201ENST00000411843 406 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RPL21P2-201ENST00000440049 481 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RPL23AP93-201ENST00000440847 484 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RNU7-187P-201ENST00000458985 68 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC026979.1-201ENST00000492525 396 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 CEACAMP10-202ENST00000495431 496 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RNU4-77P-201ENST00000516692 156 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 CYCSP27-201ENST00000527643 293 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AP001781.1-201ENST00000530977 207 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 MTND6P33-201ENST00000571794 183 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AL355812.1-201ENST00000603215 216 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC062037.2-201ENST00000610137 73 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 MIR7154-201ENST00000620673 73 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SEC61A2Q9H9S3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 ZNF72P-201ENST00000425869 1908 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AL133243.3-201ENST00000617415 3004 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 SAGE4P-201ENST00000442271 3381 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 Y_RNA.151-201ENST00000363566 112 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 SNORD113.2-201ENST00000364166 89 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 Y_RNA.396-201ENST00000383949 103 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 Y_RNA.424-201ENST00000384063 103 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RNU6-146P-201ENST00000384602 108 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RNA5SP397-201ENST00000391323 118 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RNU6-55P-201ENST00000411092 107 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC011933.1-201ENST00000413334 321 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 SSXP9-201ENST00000417503 292 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC008065.1-201ENST00000428525 348 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RPS24P13-201ENST00000442520 397 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 FTH1P25-201ENST00000447665 469 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 SUMO1P2-201ENST00000452524 304 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RPL7P23-201ENST00000493874 747 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC114801.2-201ENST00000503825 781 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC009901.1-201ENST00000506703 541 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RNA5SP446-201ENST00000515955 82 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RNA5SP154-201ENST00000516193 111 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 Y_RNA.668-201ENST00000516233 93 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RNU6-677P-201ENST00000516914 101 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 RN7SKP60-201ENST00000516985 239 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC067852.3-201ENST00000589177 561 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC012669.1-201ENST00000603209 283 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC104763.2-201ENST00000604179 382 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC107871.2-201ENST00000612894 502 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AL450472.3-201ENST00000615578 367 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 AC078938.1-201ENST00000620993 318 ntBASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SEC61A2Q9H9S3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms