Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RMST_5.1-201ENST00000618704 126 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 ZNF519P1-201ENST00000449011 1626 ntBASIC1.73□□□□□ -2.13
SCAPERQ9BY12 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 RPS29P23-201ENST00000458635 123 ntBASIC1.73□□□□□ -2.13
SCAPERQ9BY12 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 MIR4295-201ENST00000585286 85 ntBASIC1.73□□□□□ -2.13
SCAPERQ9BY12 AL391646.1-201ENST00000603860 190 ntBASIC1.73□□□□□ -2.13
SCAPERQ9BY12 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 AC109809.1-201ENST00000619665 545 ntBASIC1.73□□□□□ -2.13
SCAPERQ9BY12 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SCAPERQ9BY12 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCAPERQ9BY12 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SCAPERQ9BY12 AC093155.1-201ENST00000440164 826 ntBASIC1.72□□□□□ -2.13
SCAPERQ9BY12 AC097493.1-201ENST00000463958 372 ntBASIC1.72□□□□□ -2.13
SCAPERQ9BY12 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.72□□□□□ -2.13
SCAPERQ9BY12 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.72□□□□□ -2.13
SCAPERQ9BY12 AC005730.3-201ENST00000583067 366 ntBASIC1.72□□□□□ -2.13
SCAPERQ9BY12 AC006338.1-201ENST00000618453 749 ntBASIC1.72□□□□□ -2.13
SCAPERQ9BY12 ZNF37BP-203ENST00000452306 1352 ntBASIC1.72□□□□□ -2.13
SCAPERQ9BY12 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCAPERQ9BY12 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCAPERQ9BY12 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 Y_RNA.393-201ENST00000383936 102 ntBASIC1.71□□□□□ -2.14
SCAPERQ9BY12 RNA5SP252-201ENST00000391131 119 ntBASIC1.71□□□□□ -2.14
SCAPERQ9BY12 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 RPL21P32-201ENST00000419877 477 ntBASIC1.71□□□□□ -2.14
SCAPERQ9BY12 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 AIMP1P2-201ENST00000425294 312 ntBASIC1.71□□□□□ -2.14
SCAPERQ9BY12 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 RNU1-98P-201ENST00000458992 160 ntBASIC1.71□□□□□ -2.14
SCAPERQ9BY12 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SCAPERQ9BY12 AC107214.2-201ENST00000608204 634 ntBASIC1.71□□□□□ -2.14
SCAPERQ9BY12 AL133370.2-201ENST00000619934 439 ntBASIC1.71□□□□□ -2.14
SCAPERQ9BY12 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
SCAPERQ9BY12 RNU1-148P-201ENST00000384472 162 ntBASIC1.7□□□□□ -2.14
SCAPERQ9BY12 CIR1P3-201ENST00000405137 479 ntBASIC1.7□□□□□ -2.14
SCAPERQ9BY12 Z77249.1-201ENST00000444622 1175 ntBASIC1.7□□□□□ -2.14
SCAPERQ9BY12 PMCHL2-203ENST00000457791 237 ntBASIC1.7□□□□□ -2.14
SCAPERQ9BY12 SETP11-201ENST00000473027 690 ntBASIC1.7□□□□□ -2.14
SCAPERQ9BY12 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.7□□□□□ -2.14
SCAPERQ9BY12 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.7□□□□□ -2.14
SCAPERQ9BY12 HMGB1P24-202ENST00000615653 685 ntBASIC1.7□□□□□ -2.14
SCAPERQ9BY12 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SCAPERQ9BY12 SGO1P2-201ENST00000429458 1589 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AC016769.3-201ENST00000396562 315 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 MIR1250-201ENST00000408098 113 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AL121601.2-201ENST00000438019 707 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 snoU13.4-201ENST00000458916 104 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 RNA5SP310-201ENST00000459084 116 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AC015908.1-201ENST00000478739 476 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AC004062.1-201ENST00000509926 645 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.69□□□□□ -2.14
SCAPERQ9BY12 SNORA31.20-201ENST00000517111 133 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AC090821.2-201ENST00000523552 176 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 GLYCAM1-201ENST00000546596 285 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 AC126118.1-201ENST00000607744 628 ntBASIC1.69□□□□□ -2.14
SCAPERQ9BY12 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.69□□□□□ -2.14
SCAPERQ9BY12 CISD1P1-201ENST00000393907 327 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 TPMTP3-201ENST00000411928 735 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 AC015922.2-201ENST00000435593 184 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 RPL30P14-201ENST00000482744 348 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 SNORA31.16-201ENST00000516773 139 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 AC118942.1-201ENST00000529674 1035 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.68□□□□□ -2.14
SCAPERQ9BY12 AL160236.1-201ENST00000556317 195 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 AC025918.2-201ENST00000558683 763 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 AGGF1P5-201ENST00000567900 919 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 AC018755.4-201ENST00000619715 454 ntBASIC1.68□□□□□ -2.14
SCAPERQ9BY12 MIR150-201ENST00000385048 84 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.67□□□□□ -2.14
SCAPERQ9BY12 HMGN2P10-201ENST00000448085 265 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 RPS23P4-201ENST00000487908 423 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AC108120.2-201ENST00000512973 294 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AC090616.3-201ENST00000582184 217 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AC110079.1-202ENST00000635213 138 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SCAPERQ9BY12 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SCAPERQ9BY12 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.67□□□□□ -2.14
SCAPERQ9BY12 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.67□□□□□ -2.14
SCAPERQ9BY12 AL049737.1-201ENST00000413920 1403 ntBASIC1.67□□□□□ -2.14
SCAPERQ9BY12 RNU1-133P-201ENST00000364867 167 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 MTCO3P46-201ENST00000425787 232 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AC244033.1-201ENST00000426826 870 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 ARL5AP3-201ENST00000439327 386 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AC108059.3-201ENST00000456388 214 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 OR10V3P-201ENST00000525712 725 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms