Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC093027.1-201ENST00000546698 429 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC007687.1-201ENST00000602704 304 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 MIR7851-201ENST00000610611 160 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC019176.2-201ENST00000611579 315 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 uc_338.5-201ENST00000611839 155 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC002550.2-201ENST00000621246 394 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AL356585.4-201ENST00000623078 1229 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.111-201ENST00000363248 100 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RNU6-1293P-201ENST00000384077 107 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 SNORA70E-201ENST00000384492 135 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RNU6-606P-201ENST00000384721 111 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC068050.1-201ENST00000394891 380 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AL356421.1-201ENST00000403255 413 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AL162578.1-201ENST00000406202 378 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 BNIP3P2-201ENST00000441221 577 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC233279.1-201ENST00000455300 423 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC004801.2-202ENST00000463559 283 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC104057.1-201ENST00000515547 497 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RNU6-277P-201ENST00000516272 106 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RNU7-30P-201ENST00000516835 62 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 SNORA70.24-201ENST00000517233 118 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 OR4R1P-201ENST00000529879 463 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AC243960.4-201ENST00000600532 288 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 AL162730.1-201ENST00000605734 292 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RNU6-156P-201ENST00000621869 107 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 MTND5P28-201ENST00000438005 1594 ntBASIC4.14□□□□□ -1.75
SALL3Q9BXA9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SALL3Q9BXA9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC130650.2-201ENST00000618736 2403 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.255-201ENST00000364581 97 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 MIR491-201ENST00000384877 84 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC009161.1-201ENST00000417306 376 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC006548.1-201ENST00000427470 102 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 RPL36P19-201ENST00000430744 301 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC108734.1-201ENST00000439549 399 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC093156.1-201ENST00000440382 670 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC008264.1-201ENST00000447612 367 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC005297.2-201ENST00000450430 606 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 HMGB1P15-201ENST00000453854 435 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 snoU13.7-201ENST00000459220 104 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 OR5BN1P-201ENST00000532955 829 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC087241.2-201ENST00000535801 324 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC023050.3-201ENST00000541142 333 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AL355375.2-201ENST00000574825 175 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 MIR3146-201ENST00000580367 79 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AL034351.1-201ENST00000605288 668 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 CR381572.1-201ENST00000625098 102 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 MIR4496-201ENST00000635896 61 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC100810.6-201ENST00000638068 285 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 AC011978.2-201ENST00000569835 2054 ntBASIC4.13□□□□□ -1.75
SALL3Q9BXA9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SALL3Q9BXA9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms