Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC174048.1-201ENST00000603389 144 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 MIR6868-201ENST00000611215 58 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 uc_338.5-201ENST00000611839 155 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC009248.2-201ENST00000619826 254 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 RNU6-50P-201ENST00000362356 103 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 RNU6-600P-201ENST00000362524 99 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 SNORA36C-201ENST00000384289 132 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 MIR606-201ENST00000384851 96 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 MIR1-2-201ENST00000384961 85 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 MIR454-201ENST00000390180 115 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 SNORA75.4-201ENST00000391278 119 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 RNU6-387P-201ENST00000411331 105 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC018630.2-202ENST00000422992 927 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 PCBP2P3-201ENST00000509726 843 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC105417.1-201ENST00000514691 285 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC105031.1-201ENST00000518550 476 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC107953.1-201ENST00000522216 297 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC007991.1-201ENST00000522680 631 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC113139.1-201ENST00000605049 239 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC233309.1-201ENST00000619522 751 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 AC007998.5-201ENST00000622938 237 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 MTND4P27-201ENST00000450813 1354 ntBASIC4.11□□□□□ -1.75
LRFN3Q9BTN0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 Y_RNA.22-201ENST00000362492 102 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 RNU6-179P-201ENST00000363350 107 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 RPL36AP10-201ENST00000421785 322 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 RPS15AP9-201ENST00000439856 381 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 BNIP3P2-201ENST00000441221 577 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 RNU7-182P-201ENST00000459009 62 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 RNU7-63P-201ENST00000459054 62 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 Y_RNA.632-201ENST00000459189 102 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 RPS29P19-201ENST00000479709 171 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC007458.1-201ENST00000542812 373 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AL352979.3-201ENST00000553515 247 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC007151.1-201ENST00000572774 483 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC010591.1-201ENST00000603941 649 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC013412.1-201ENST00000610687 192 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC015914.2-201ENST00000618167 288 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC008121.3-201ENST00000618726 433 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LRFN3Q9BTN0 AC139713.2-215ENST00000641428 5037 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC027290.2-201ENST00000623210 18662 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RPL7P26-201ENST00000333817 754 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC067945.1-201ENST00000342609 618 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RNA5SP50-201ENST00000363731 107 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 Y_RNA.367-201ENST00000365544 101 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 Y_RNA.474-201ENST00000384341 102 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 MIR708-201ENST00000390708 88 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms