Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 RN7SKP298-201ENST00000515950 94 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 Y_RNA.689-201ENST00000516589 107 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 MIR4425-201ENST00000580572 84 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 MIR3611-201ENST00000584484 83 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AC068790.2-201ENST00000602601 557 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AC084782.3-201ENST00000612282 578 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AC130324.3-201ENST00000614165 542 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AC091564.4-201ENST00000533934 2194 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HERPUD2Q9BSE4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 MIR670-201ENST00000390142 98 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC007899.1-201ENST00000412776 775 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 CDK8P2-201ENST00000415020 547 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC068533.1-201ENST00000418542 415 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 GPR143P-201ENST00000434155 205 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 RPS24P13-201ENST00000442520 397 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC079781.2-201ENST00000446424 169 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 RN7SL594P-201ENST00000470590 287 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC004924.1-201ENST00000480160 781 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC022447.1-201ENST00000515358 464 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 RN7SKP18-201ENST00000516005 275 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 SCARNA24.1-201ENST00000516465 137 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-410P-201ENST00000517006 107 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 MIR4444-1-201ENST00000581696 74 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 MIR4444-2-201ENST00000584390 74 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC098848.2-201ENST00000588023 330 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AL158032.1-201ENST00000605401 106 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AC098614.4-201ENST00000607601 462 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AL512643.1-201ENST00000635735 524 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 AL034408.1-202ENST00000636088 415 ntBASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HERPUD2Q9BSE4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC058791.1-201ENST00000608412 3198 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 OR5J1P-201ENST00000313544 939 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 Y_RNA.359-201ENST00000365498 102 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 MIR301A-201ENST00000385261 86 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC114491.1-201ENST00000416095 246 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AL031667.1-201ENST00000440222 725 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 CYCSP32-201ENST00000440548 321 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 MTND1P29-201ENST00000448112 647 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 RPS3AP46-201ENST00000448352 682 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 MRPS17P3-201ENST00000465453 385 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC006483.1-201ENST00000487308 313 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC114786.4-201ENST00000508771 728 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC079140.3-201ENST00000511111 550 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 HMGN2P15-201ENST00000585707 270 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC073648.5-201ENST00000603502 305 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 DUSP12P1-201ENST00000612874 516 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AL359547.2-201ENST00000615810 418 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AC068880.5-201ENST00000624331 290 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 Z99571.1-201ENST00000636677 394 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 AP003399.1-201ENST00000637534 361 ntBASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HERPUD2Q9BSE4 MIR767-201ENST00000390228 109 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC133104.1-201ENST00000429100 218 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 BX679664.1-201ENST00000434429 253 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 RPS20P5-201ENST00000434808 360 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 RPL37P4-201ENST00000448908 268 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AL122001.1-201ENST00000457027 370 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 SNORD105B-201ENST00000458770 79 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 RPS29P12-201ENST00000460178 152 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms