Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 ZNF863P-201ENST00000426746 417 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AC091390.1-201ENST00000433904 331 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 RSU1P2-202ENST00000437884 485 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 RPL31P58-201ENST00000469001 379 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AP005597.4-201ENST00000526762 229 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 MIR3158-1-201ENST00000583596 81 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 SNRPGP19-201ENST00000603826 189 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 FTX_3.1-201ENST00000610451 147 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AC091953.2-201ENST00000623979 160 ntBASIC1.15□□□□□ -2.23
VPS25Q9BRG1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS25Q9BRG1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 RNU1-42P-201ENST00000364033 160 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 RNU6-7-201ENST00000364784 107 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 RNU6-8-201ENST00000365467 107 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 MIR134-201ENST00000385258 73 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AC009310.1-201ENST00000414414 451 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 BPY2DP-201ENST00000422208 265 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 FABP5P14-201ENST00000437273 393 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 HIGD1AP2-201ENST00000446367 280 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AC011352.3-201ENST00000505162 593 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 ANXA2P1-201ENST00000505539 926 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 SNORA4.4-201ENST00000515921 135 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 RNA5SP112-201ENST00000515937 99 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AL359212.1-201ENST00000556608 614 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AC234778.2-201ENST00000566241 354 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 MIR4319-201ENST00000577285 85 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 SRGNP1-201ENST00000603392 451 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AL031176.1-201ENST00000604554 466 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 AC009974.1-201ENST00000608881 455 ntBASIC1.14□□□□□ -2.23
VPS25Q9BRG1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
VPS25Q9BRG1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
VPS25Q9BRG1 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 RNA5SP240-201ENST00000365355 128 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 RNU6-76P-201ENST00000384060 104 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 RNU2-15P-201ENST00000410692 191 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 AL139156.1-201ENST00000412785 841 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.13□□□□□ -2.23
VPS25Q9BRG1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS25Q9BRG1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS25Q9BRG1 MTND2P21-201ENST00000436242 1042 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS25Q9BRG1 PTENP1-201ENST00000447117 1215 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 MTAPP1-201ENST00000489154 819 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 AC034114.1-201ENST00000520293 285 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 AP004607.1-201ENST00000524456 203 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 CCNG2P1-201ENST00000549521 1000 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 MIR5089-201ENST00000580047 84 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS25Q9BRG1 AC103710.2-201ENST00000609912 942 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 AL445493.3-201ENST00000619568 477 ntBASIC1.13□□□□□ -2.23
VPS25Q9BRG1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 OR5J1P-201ENST00000313544 939 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 RNU2-41P-201ENST00000410991 178 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC018630.2-202ENST00000422992 927 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 VN1R108P-201ENST00000431580 830 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC241584.1-201ENST00000438469 1241 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC098831.1-201ENST00000440661 216 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC044797.1-201ENST00000445744 679 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 MTCO3P11-201ENST00000455103 774 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 MTCO3P2-201ENST00000457365 171 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 TRBV1-201ENST00000476502 284 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC099513.1-201ENST00000490423 301 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 RPS29P11-201ENST00000496507 171 ntBASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS25Q9BRG1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms