Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
SPG11Q96JI7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.84□□□□□ -2.28
SPG11Q96JI7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.84□□□□□ -2.28
SPG11Q96JI7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.84□□□□□ -2.28
SPG11Q96JI7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.84□□□□□ -2.28
SPG11Q96JI7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
SPG11Q96JI7 SNORD14B-201ENST00000364533 90 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.83□□□□□ -2.28
SPG11Q96JI7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.83□□□□□ -2.28
SPG11Q96JI7 FO393415.2-201ENST00000480085 343 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 HMGB3P3-201ENST00000510526 400 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC067942.3-201ENST00000512025 362 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 SNORA31.16-201ENST00000516773 139 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.83□□□□□ -2.28
SPG11Q96JI7 AL031601.2-202ENST00000622650 282 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.83□□□□□ -2.28
SPG11Q96JI7 RPS29P23-201ENST00000458635 123 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC008379.1-201ENST00000463655 464 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC026801.1-201ENST00000497178 464 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 RNU6-964P-201ENST00000516524 69 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 SNORA31.23-201ENST00000517219 133 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC025918.2-201ENST00000558683 763 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 MTCO1P40-201ENST00000574371 625 ntBASIC0.83□□□□□ -2.28
SPG11Q96JI7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
SPG11Q96JI7 AC245060.5-201ENST00000610778 3293 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 PTP4A1P1-201ENST00000420539 515 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 MTCO3P46-201ENST00000425787 232 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 SUMO1P4-201ENST00000429430 302 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 COX6CP18-201ENST00000448769 222 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 SNRPGP12-201ENST00000449481 213 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 RBM43P1-201ENST00000476891 1081 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 AC010625.1-201ENST00000511296 403 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.82□□□□□ -2.28
SPG11Q96JI7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.82□□□□□ -2.28
SPG11Q96JI7 AC010735.1-201ENST00000567305 1026 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.82□□□□□ -2.28
SPG11Q96JI7 DPRXP5-201ENST00000604662 539 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.82□□□□□ -2.28
SPG11Q96JI7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SPG11Q96JI7 OR5H6-203ENST00000642105 978 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
SPG11Q96JI7 AC138915.1-201ENST00000565427 1685 ntBASIC0.82□□□□□ -2.28
SPG11Q96JI7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SPG11Q96JI7 UBE2V1P9-201ENST00000414760 368 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 OR51A5P-201ENST00000415429 942 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 ARF4P4-201ENST00000439608 520 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 RNA5SP310-201ENST00000459084 116 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 RNU6-758P-201ENST00000516292 89 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 OR4R1P-201ENST00000529879 463 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 Z69720.2-201ENST00000624755 279 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SPG11Q96JI7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 OR1L1-202ENST00000373686 1083 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 AL161788.1-201ENST00000441805 169 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 AC022431.1-201ENST00000450941 438 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 AC121161.1-201ENST00000510606 652 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.81□□□□□ -2.28
SPG11Q96JI7 MIR4802-201ENST00000581881 80 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 SNORD114-21-201ENST00000606412 72 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 AC092140.2-201ENST00000618027 521 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 AC011330.2-201ENST00000621680 635 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 HAUS6P2-201ENST00000433254 2404 ntBASIC0.81□□□□□ -2.28
SPG11Q96JI7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 SNORA6-201ENST00000384033 151 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 RNU6-185P-201ENST00000384421 107 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 RNU6-955P-201ENST00000410497 104 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 BX682237.1-201ENST00000415016 335 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 RNA5SP167-201ENST00000365461 116 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 MIR329-1-201ENST00000385028 80 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC092745.2-202ENST00000411880 369 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 AL022718.1-201ENST00000412004 84 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 ZNF90P2-204ENST00000419323 1075 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 AL591704.2-201ENST00000421658 181 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 RPS29P28-201ENST00000446439 141 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC239798.3-201ENST00000454459 408 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC091057.2-201ENST00000602594 792 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 AC012443.1-201ENST00000605605 231 ntBASIC0.8□□□□□ -2.28
SPG11Q96JI7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SPG11Q96JI7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
SPG11Q96JI7 MIR513A1-201ENST00000385138 129 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 TXNP7-201ENST00000406296 293 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.79□□□□□ -2.28
SPG11Q96JI7 SNORD97-201ENST00000459187 142 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms