Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.59□□□□□ -1.67
SHDQ96IW2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.59□□□□□ -1.67
SHDQ96IW2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.59□□□□□ -1.67
SHDQ96IW2 LRRC37A5P-203ENST00000580181 585 ntBASIC4.59□□□□□ -1.67
SHDQ96IW2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHDQ96IW2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.59□□□□□ -1.67
SHDQ96IW2 MIR3171-201ENST00000584270 74 ntBASIC4.59□□□□□ -1.67
SHDQ96IW2 MIR6128-201ENST00000615528 109 ntBASIC4.59□□□□□ -1.67
SHDQ96IW2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.59□□□□□ -1.67
SHDQ96IW2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHDQ96IW2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
SHDQ96IW2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
SHDQ96IW2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SHDQ96IW2 MAPK10-286ENST00000641208 8747 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 AC005183.1-201ENST00000603687 1979 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHDQ96IW2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.58□□□□□ -1.68
SHDQ96IW2 AL592182.3-201ENST00000642132 3304 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHDQ96IW2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHDQ96IW2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SHDQ96IW2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHDQ96IW2 Y_RNA.202-201ENST00000364083 110 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
SHDQ96IW2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
SHDQ96IW2 RPL5P18-201ENST00000406671 891 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 AC007738.1-201ENST00000413892 348 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 Z85995.1-201ENST00000415547 335 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 AL353621.1-201ENST00000418219 243 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 UBE2V1P4-201ENST00000425374 344 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 RPL7P2-201ENST00000427639 268 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.58□□□□□ -1.68
SHDQ96IW2 SUMO2P6-201ENST00000505273 288 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 MTND3P25-201ENST00000509243 135 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 MTCYBP40-201ENST00000509390 1135 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.58□□□□□ -1.68
SHDQ96IW2 SNORA70.16-201ENST00000516390 95 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.58□□□□□ -1.68
SHDQ96IW2 AC087369.1-201ENST00000520775 996 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 AC006270.2-201ENST00000578523 652 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 AC006504.6-201ENST00000590142 199 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.58□□□□□ -1.68
SHDQ96IW2 NUTF2P8-201ENST00000604593 363 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 MIR6075-201ENST00000620782 95 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.58□□□□□ -1.68
SHDQ96IW2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.58□□□□□ -1.68
SHDQ96IW2 AC140479.6-201ENST00000633535 357 ntBASIC4.58□□□□□ -1.68
SHDQ96IW2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHDQ96IW2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHDQ96IW2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHDQ96IW2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHDQ96IW2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.57□□□□□ -1.68
SHDQ96IW2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
SHDQ96IW2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 RNA5SP513-201ENST00000364648 118 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 RNU6-1303P-201ENST00000364841 107 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 RNU2-33P-201ENST00000410344 192 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 RNU6-607P-201ENST00000411283 108 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 RNU6-1304P-201ENST00000411374 106 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 RPS15AP6-201ENST00000420703 385 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 AL158156.1-201ENST00000422509 473 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 AC007919.1-201ENST00000429380 217 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AC004938.1-201ENST00000438468 308 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AP000873.1-201ENST00000463987 400 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AC084198.1-201ENST00000477747 402 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AC004024.1-201ENST00000549244 247 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 AC053481.4-201ENST00000583164 216 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AC005344.1-201ENST00000613391 459 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.57□□□□□ -1.68
SHDQ96IW2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHDQ96IW2 AC104623.2-202ENST00000623477 4002 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.57□□□□□ -1.68
SHDQ96IW2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SHDQ96IW2 AP001642.1-201ENST00000624727 2117 ntBASIC4.57□□□□□ -1.68
SHDQ96IW2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.56□□□□□ -1.68
SHDQ96IW2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHDQ96IW2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHDQ96IW2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHDQ96IW2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHDQ96IW2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SHDQ96IW2 RNU6-600P-201ENST00000362524 99 ntBASIC4.56□□□□□ -1.68
SHDQ96IW2 SNORD3E-201ENST00000362899 217 ntBASIC4.56□□□□□ -1.68
SHDQ96IW2 Y_RNA.197-201ENST00000364004 102 ntBASIC4.56□□□□□ -1.68
SHDQ96IW2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms