Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SKA1Q96BD8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 SNORD21-201ENST00000383953 95 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 Y_RNA.598-201ENST00000410480 95 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC126124.2-201ENST00000413542 321 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC005326.1-201ENST00000429197 123 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 SAR1AP4-201ENST00000429225 591 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 COX6CP12-201ENST00000446748 202 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC125238.1-201ENST00000448842 249 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 RN7SL594P-201ENST00000470590 287 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 RPS29P2-201ENST00000479278 136 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 SUMO2P6-201ENST00000505273 288 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 RN7SKP282-201ENST00000516824 299 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 RNA5SP165-201ENST00000517142 115 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 MTCO1P47-201ENST00000523889 1271 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 ARL2BPP2-201ENST00000550907 489 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC135628.1-201ENST00000568867 534 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC067852.3-201ENST00000589177 561 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC104763.2-201ENST00000604179 382 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC025594.3-201ENST00000613068 790 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AL589994.2-201ENST00000621124 579 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 AC091931.1-201ENST00000623488 728 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.48□□□□□ -1.85
SKA1Q96BD8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SKA1Q96BD8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SKA1Q96BD8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SKA1Q96BD8 RNU6-512P-201ENST00000364438 103 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SKA1Q96BD8 DYNLT3P1-201ENST00000378574 347 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 RNU2-36P-201ENST00000410361 191 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC096664.2-201ENST00000411843 406 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AL358075.3-201ENST00000426289 226 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 ISCA1P1-201ENST00000426679 387 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC009414.1-201ENST00000427200 443 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SKA1Q96BD8 HMGB1P9-201ENST00000429856 646 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 RPL36AP53-201ENST00000432891 316 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 MTND4P25-201ENST00000441039 533 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 RPL37P4-201ENST00000448908 268 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 RPS15AP27-201ENST00000449183 343 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 MTCO2P29-201ENST00000465212 189 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC110794.1-201ENST00000505816 425 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC009901.1-201ENST00000506703 541 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 FABP5P5-201ENST00000515537 406 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 SNORA70.18-201ENST00000516696 98 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 RNU6-143P-201ENST00000516942 93 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC087373.1-201ENST00000524920 491 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 NACAP3-201ENST00000552100 481 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AL359212.1-201ENST00000556608 614 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AL158211.1-201ENST00000566763 763 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 AL355598.1-201ENST00000604169 202 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC007619.2-201ENST00000605743 379 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC103710.2-201ENST00000609912 942 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 U4.6-201ENST00000621618 127 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC007998.5-201ENST00000622938 237 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 AC002064.3-201ENST00000623448 346 ntBASIC3.47□□□□□ -1.85
SKA1Q96BD8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SKA1Q96BD8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SKA1Q96BD8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA1Q96BD8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.46□□□□□ -1.85
SKA1Q96BD8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SKA1Q96BD8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.46□□□□□ -1.85
SKA1Q96BD8 AC004972.1-201ENST00000623934 2209 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA1Q96BD8 AL139397.2-201ENST00000404529 772 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 RNU2-8P-201ENST00000410727 190 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA1Q96BD8 MTND2P18-201ENST00000419962 1030 ntBASIC3.46□□□□□ -1.86
SKA1Q96BD8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms