Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.89□□□□□ -2.27
USP9XQ93008 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.89□□□□□ -2.27
USP9XQ93008 AP005597.4-201ENST00000526762 229 ntBASIC0.89□□□□□ -2.27
USP9XQ93008 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.89□□□□□ -2.27
USP9XQ93008 AC093510.2-201ENST00000562820 896 ntBASIC0.89□□□□□ -2.27
USP9XQ93008 FAM106CP-201ENST00000582212 507 ntBASIC0.89□□□□□ -2.27
USP9XQ93008 MFSD8-213ENST00000641134 1327 ntBASIC0.89□□□□□ -2.27
USP9XQ93008 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
USP9XQ93008 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
USP9XQ93008 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.89□□□□□ -2.27
USP9XQ93008 RPS26P21-201ENST00000475397 348 ntBASIC0.89□□□□□ -2.27
USP9XQ93008 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
USP9XQ93008 U4.2-201ENST00000618561 85 ntBASIC0.89□□□□□ -2.27
USP9XQ93008 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.89□□□□□ -2.27
USP9XQ93008 AC116618.1-201ENST00000634617 774 ntBASIC0.89□□□□□ -2.27
USP9XQ93008 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
USP9XQ93008 Y_RNA.453-201ENST00000384223 109 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 MIR1285-1-201ENST00000408593 84 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AP000949.1-201ENST00000438328 629 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 ARPC3P2-201ENST00000457786 533 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 HMGB3P30-201ENST00000457863 606 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 snoU13.11-201ENST00000459219 104 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AC104692.1-201ENST00000472406 90 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 RPL21P93-201ENST00000480465 489 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AC233702.1-201ENST00000482905 502 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AC093591.1-201ENST00000491435 481 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 PRELID3BP4-201ENST00000515476 571 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AC090897.2-201ENST00000581715 130 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 XIST_intron.1-201ENST00000619444 68 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AP000648.3-201ENST00000623539 4507 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.88□□□□□ -2.27
USP9XQ93008 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.88□□□□□ -2.27
USP9XQ93008 RNU6-16P-201ENST00000384385 107 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.88□□□□□ -2.27
USP9XQ93008 snoU109.1-201ENST00000459339 135 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.88□□□□□ -2.27
USP9XQ93008 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.88□□□□□ -2.27
USP9XQ93008 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.88□□□□□ -2.27
USP9XQ93008 AP001180.3-201ENST00000582221 145 ntBASIC0.88□□□□□ -2.27
USP9XQ93008 RNU2-37P-201ENST00000410695 177 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 HMGB1P49-201ENST00000418882 569 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.87□□□□□ -2.27
USP9XQ93008 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.87□□□□□ -2.27
USP9XQ93008 AC025918.2-201ENST00000558683 763 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 ZNF192P1-203ENST00000565888 810 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.87□□□□□ -2.27
USP9XQ93008 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.87□□□□□ -2.27
USP9XQ93008 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
USP9XQ93008 GDI2P2-201ENST00000445131 608 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 AL136380.1-201ENST00000447970 162 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.87□□□□□ -2.27
USP9XQ93008 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.87□□□□□ -2.27
USP9XQ93008 AC092754.2-201ENST00000463506 460 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.87□□□□□ -2.27
USP9XQ93008 RNU6-347P-201ENST00000516658 105 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 EIF4A1P12-201ENST00000551910 141 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 SETP2-201ENST00000553886 926 ntBASIC0.87□□□□□ -2.27
USP9XQ93008 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.86□□□□□ -2.27
USP9XQ93008 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.86□□□□□ -2.27
USP9XQ93008 AC099336.2-201ENST00000422457 254 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 DPPA3P1-201ENST00000448050 469 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 RPL31P58-201ENST00000469001 379 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 RPL7P18-201ENST00000478965 734 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.86□□□□□ -2.27
USP9XQ93008 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.86□□□□□ -2.27
USP9XQ93008 MTCO3P24-201ENST00000572729 782 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 AC005786.1-201ENST00000588553 154 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.86□□□□□ -2.27
USP9XQ93008 MIR7974-201ENST00000615835 79 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 MIR153-2-201ENST00000385225 87 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 TXNP7-201ENST00000406296 293 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 BZW1P2-201ENST00000473537 826 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.86□□□□□ -2.27
USP9XQ93008 AC114322.1-201ENST00000506771 926 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.86□□□□□ -2.27
USP9XQ93008 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.86□□□□□ -2.27
USP9XQ93008 MIR6840-201ENST00000611937 71 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.86□□□□□ -2.27
USP9XQ93008 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
USP9XQ93008 Y_RNA.288-201ENST00000364854 92 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 Y_RNA.413-201ENST00000384007 102 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.85□□□□□ -2.27
USP9XQ93008 Y_RNA.754-201ENST00000476024 102 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 AC112198.4-201ENST00000515450 351 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 RNU6-56P-201ENST00000516986 93 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 CYCSP2-201ENST00000558168 301 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.85□□□□□ -2.27
USP9XQ93008 SNRPGP17-201ENST00000603780 214 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 RPL21P136-201ENST00000605378 396 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 Y_RNA.790-201ENST00000614282 102 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 Y_RNA.782-201ENST00000614695 102 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
USP9XQ93008 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
USP9XQ93008 RNU6-700P-201ENST00000391043 107 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 RNA5SP511-201ENST00000410487 115 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 AC240442.1-201ENST00000616055 283 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 AC068831.7-201ENST00000616954 363 ntBASIC0.85□□□□□ -2.27
USP9XQ93008 OR5AQ1P-203ENST00000641818 1529 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms