Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.33□□□□□ -1.72
SH3RF2Q8TEC5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SH3RF2Q8TEC5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 MTND5P10-201ENST00000603719 1809 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 Y_RNA.135-201ENST00000363439 95 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 Y_RNA.197-201ENST00000364004 102 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AL391417.1-201ENST00000404100 426 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 MIR1179-201ENST00000408703 91 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-954P-201ENST00000411355 107 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 ATG3P1-201ENST00000419507 911 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 PDSS1P1-201ENST00000422953 1114 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 RPL7P2-201ENST00000427639 268 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-1069P-201ENST00000516612 133 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 SNORA31.22-201ENST00000517204 135 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 XIAPP1-201ENST00000603162 600 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AC022418.1-201ENST00000624118 445 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 ZNF519P1-201ENST00000449011 1626 ntBASIC4.32□□□□□ -1.72
SH3RF2Q8TEC5 AC000123.3-201ENST00000624029 4975 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-562P-201ENST00000362731 107 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-173P-201ENST00000364215 104 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-601P-201ENST00000384540 107 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-1160P-201ENST00000384546 104 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-14P-201ENST00000384630 106 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 SNORA48.7-201ENST00000391302 135 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL590704.1-201ENST00000402856 794 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 MTATP6P4-201ENST00000427725 675 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 Z82205.1-201ENST00000428456 297 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL591212.2-201ENST00000433923 257 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RPL32P28-201ENST00000443577 397 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 ABCF2P2-201ENST00000450549 296 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 HMGB3P22-202ENST00000451823 572 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RPL31P60-201ENST00000478450 367 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC012158.1-204ENST00000483430 465 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL163540.1-201ENST00000485382 386 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC020593.1-201ENST00000507399 299 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC093303.1-201ENST00000514549 295 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 Y_RNA.711-201ENST00000516993 102 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC074050.1-201ENST00000563247 211 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC053481.4-201ENST00000583164 216 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 DUSP12P1-201ENST00000612874 516 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL157817.1-201ENST00000614264 790 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL138721.1-201ENST00000616756 179 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AC010378.1-201ENST00000619270 362 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 AL353748.2-201ENST00000622148 471 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 SDAD1P2-201ENST00000441308 2028 ntBASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF2Q8TEC5 Z73965.1-201ENST00000623412 2297 ntBASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 AL592182.3-201ENST00000642132 3304 ntBASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 Y_RNA.132-201ENST00000363421 102 ntBASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 RNU6-1188P-201ENST00000363795 107 ntBASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 SNORA33.2-201ENST00000365413 134 ntBASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 SNORA75.4-201ENST00000391278 119 ntBASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 AL121834.1-202ENST00000404494 277 ntBASIC4.3□□□□□ -1.72
SH3RF2Q8TEC5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms