Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL161431.1-201ENST00000618966 4205 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC092593.1-201ENST00000515413 1815 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 RNU6-501P-201ENST00000364072 100 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 SNORA25.6-201ENST00000364121 118 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 MIR181A2-201ENST00000384863 110 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 MIR592-201ENST00000384959 97 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 TXNP7-201ENST00000406296 293 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 RPL21P24-201ENST00000413752 448 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC091390.3-201ENST00000426478 338 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 RPL7P34-201ENST00000433316 712 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 RPS29P6-201ENST00000438196 145 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SKA3Q8IX90 ART2BP-201ENST00000453501 499 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 RNU7-59P-201ENST00000459101 61 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC068587.2-201ENST00000478386 781 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 RNU6-759P-201ENST00000516740 103 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 RNU6-232P-201ENST00000517144 64 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 HMGB1P41-201ENST00000520234 440 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SKA3Q8IX90 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SKA3Q8IX90 HPRT1P3-201ENST00000539521 576 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 PCMTD1P2-201ENST00000565017 355 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC145350.1-201ENST00000567426 208 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 AL356575.1-201ENST00000603008 283 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AP000403.1-201ENST00000603349 851 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 MTCYBP22-201ENST00000603788 447 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 MIR7844-201ENST00000616161 122 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC010338.1-201ENST00000621823 717 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC079248.2-201ENST00000623779 326 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC079416.3-201ENST00000624479 549 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 AC006927.3-201ENST00000638789 384 ntBASIC2.48□□□□□ -2.01
SKA3Q8IX90 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SKA3Q8IX90 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SKA3Q8IX90 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SKA3Q8IX90 TPTE2P4-201ENST00000258589 1605 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 RNU5A-8P-201ENST00000364102 114 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 RNU6-741P-201ENST00000383889 107 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 SNORA18.3-201ENST00000384122 132 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC078974.1-201ENST00000411597 223 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AL512844.2-201ENST00000433990 593 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 RPL37P21-201ENST00000435890 276 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC093156.1-201ENST00000440382 670 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AL049734.2-201ENST00000441066 616 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 ELOCP30-201ENST00000447108 299 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 RPS20P20-201ENST00000460498 340 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AP000852.1-201ENST00000472460 573 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 BZW1P2-201ENST00000473537 826 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 RPL23AP41-201ENST00000484754 458 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 LARP1BP2-201ENST00000486594 519 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC005178.1-201ENST00000508392 440 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 TBCAP3-201ENST00000512475 312 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 NRON-201ENST00000517270 370 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 DUXAP5-201ENST00000529668 529 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 CYCSP39-201ENST00000565821 309 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC024153.1-201ENST00000603103 365 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 NUTF2P8-201ENST00000604593 363 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 OR10AB1P-201ENST00000609613 938 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC010133.1-201ENST00000615809 842 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AP003485.2-201ENST00000623636 610 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AL137790.1-201ENST00000634283 177 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC097655.1-201ENST00000635075 318 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SKA3Q8IX90 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SKA3Q8IX90 AC091564.4-201ENST00000533934 2194 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.47□□□□□ -2.01
SKA3Q8IX90 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SKA3Q8IX90 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms