Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC116337.1-201ENST00000509680 687 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.670-201ENST00000516255 105 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC025423.5-201ENST00000550230 219 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC079587.1-201ENST00000603846 277 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 MIR15A-201ENST00000607334 83 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC005014.2-201ENST00000607795 599 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 MIR6716-201ENST00000613413 80 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 PISRT1.1-201ENST00000616930 107 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AL078596.1-201ENST00000624856 447 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 MTND5P30-201ENST00000452896 1731 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 PRO1804-201ENST00000623780 2050 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-463P-201ENST00000384340 107 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-45P-201ENST00000384471 107 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AL590704.1-201ENST00000402856 794 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 SNORA11F-201ENST00000408237 128 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-1050P-201ENST00000410388 107 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 EIF4EP1-201ENST00000422311 642 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AL358176.2-201ENST00000425769 204 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 HIGD1AP11-201ENST00000438361 280 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RPL26P6-201ENST00000440913 438 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AL035666.1-201ENST00000446195 348 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-953P-201ENST00000459154 107 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC010618.1-201ENST00000469924 477 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC026782.1-201ENST00000512952 449 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 Y_RNA.661-201ENST00000516003 99 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 SNORA31.9-201ENST00000516429 84 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU1-54P-201ENST00000517181 120 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RNU4-60P-201ENST00000517239 135 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC002044.1-201ENST00000606707 158 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC083806.3-201ENST00000614016 455 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC010205.1-201ENST00000616668 449 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC007485.1-201ENST00000616755 206 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC007546.2-201ENST00000623996 360 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 AC068254.2-201ENST00000623938 3577 ntBASIC4.27□□□□□ -1.73
TRIM48Q8IWZ4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-1115P-201ENST00000362490 106 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RNA5SP175-201ENST00000364275 119 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-128P-201ENST00000383976 107 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-95P-201ENST00000384697 107 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 Y_RNA.594-201ENST00000410373 140 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RPL23AP26-201ENST00000412728 464 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RPL21P90-201ENST00000415692 466 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RPS12P23-201ENST00000419579 400 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RPL23AP69-201ENST00000431134 458 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC236972.1-201ENST00000433225 199 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 IPO7P1-201ENST00000442031 636 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 HSFY6P-201ENST00000445573 403 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 PRDX3P3-201ENST00000447765 522 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC010469.1-201ENST00000463864 576 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 UQCRHP4-201ENST00000471686 272 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC104136.1-201ENST00000512969 394 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-120P-201ENST00000516077 103 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 RNU6-976P-201ENST00000516086 111 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 Y_RNA.708-201ENST00000516950 96 ntBASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM48Q8IWZ4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms